RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 ZMYND19Q96E35 227 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-214ENST00000554819 ZNF251Q9BRH9 671 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 COL4A1P02462 1669 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 TENM1Q9UKZ4 2725 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 IGSF23A1L1A6 192 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 SIGLEC16A6NMB1 481 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 ZNF7P17097 686 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-214ENST00000554819 INPP1P49441 399 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 TSPAN31Q12999 210 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 N4BP2L1Q5TBK1 243 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-214ENST00000554819 HBMQ6B0K9 141 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 Q6ZSA8 131 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 ERMNQ8TAM6 284 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 DTD1Q8TEA8 209 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 DCANP1Q8TF63 244 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 FAM206AQ9NX38 181 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 HEY1Q9Y5J3 304 aa1.17□□□□□ -2.22
SCFD1-214ENST00000554819 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-214ENST00000554819 TOR1AO14656 332 aa1.16□□□□□ -2.22
SCFD1-214ENST00000554819 VAPBO95292 243 aa1.16□□□□□ -2.22
SCFD1-214ENST00000554819 RPA3P35244 121 aaPredicted RBP1.16□□□□□ -2.22
SCFD1-214ENST00000554819 PRDX1Q06830 199 aaKnown RBP1.16□□□□□ -2.22
SCFD1-214ENST00000554819 CIDECQ96AQ7 238 aaPredicted RBP1.16□□□□□ -2.22
SCFD1-214ENST00000554819 RABL2AQ9UBK7 228 aaPredicted RBP1.16□□□□□ -2.22
SCFD1-214ENST00000554819 TBL2Q9Y4P3 447 aaKnown RBP1.16□□□□□ -2.22
SCFD1-214ENST00000554819 CACNA1SQ13698 1873 aa1.16□□□□□ -2.22
SCFD1-214ENST00000554819 TRPM6Q9BX84 2022 aa1.15□□□□□ -2.22
SCFD1-214ENST00000554819 TRAV8-2A0A0B4J237 113 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 ZMPSTE24O75844 475 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 SC5DO75845 299 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 LTAP01374 205 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 OR4A8P0C604 315 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 TSPOP30536 169 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 SPAM1P38567 509 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 MAGEA3P43357 314 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 HTR4Q13639 388 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 CAVIN4Q5BKX8 364 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 C6orf183Q5T699 404 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 FAM162BQ5T6X4 162 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 SDIM1Q6ZPB5 146 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 DGAT2L6Q6ZPD8 337 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 CCDC121Q6ZUS5 278 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 PDCL2Q8N4E4 241 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 ZNF321PQ8N8H1 164 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 ASCC1Q8N9N2 400 aaKnown RBP1.15□□□□□ -2.23
SCFD1-214ENST00000554819 ACBD4Q8NC06 268 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 LGALS14Q8TCE9 139 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 MITD1Q8WV92 249 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 EBPLQ9BY08 206 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 STMN3Q9NZ72 180 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 WASHC3Q9Y3C0 194 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 OTOFQ9HC10 1997 aa1.15□□□□□ -2.23
SCFD1-214ENST00000554819 MPDZO75970 2070 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 MUC21A0A0G2JKD1 596 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 MUC21A0A140T8X8 626 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 RNASEK-C17orf49H0YIS7 233 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 FGF16O43320 207 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 OTCP00480 354 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 CRYGDP07320 174 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 NQO1P15559 274 aaKnown RBP1.14□□□□□ -2.23
SCFD1-214ENST00000554819 SPNP16150 400 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 AKR1C2P52895 323 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 RWDD2BP57060 319 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 RAB2AP61019 212 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 ZNF117Q03924 483 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 TRIP13Q15645 432 aaPredicted RBP1.14□□□□□ -2.23
SCFD1-214ENST00000554819 VAMP3Q15836 100 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 HNRNPA1L2Q32P51 320 aaKnown RBP1.14□□□□□ -2.23
SCFD1-214ENST00000554819 FAM183BPQ6ZVS7 135 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 ZFAND2AQ8N6M9 145 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 TMBIM1Q969X1 311 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 ZNF625Q96I27 306 aaPredicted RBP1.14□□□□□ -2.23
SCFD1-214ENST00000554819 RMND1Q9NWS8 449 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 MTCH2Q9Y6C9 303 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 BZW2Q9Y6E2 419 aaKnown RBP1.14□□□□□ -2.23
SCFD1-214ENST00000554819 YLPM1P49750 1951 aaKnown RBP1.14□□□□□ -2.23
SCFD1-214ENST00000554819 PTPRJQ12913 1337 aa1.14□□□□□ -2.23
SCFD1-214ENST00000554819 DOCK10Q96BY6 2186 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 hCG_2039718K7EN88 272 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 GABRA3P34903 492 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 MP68P56378 58 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 TSPAN5P62079 268 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 VSNL1P62760 191 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 HES1Q14469 280 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 TRAM1Q15629 374 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 VN1R4Q7Z5H5 301 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 OR4X1Q8NH49 305 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 OR52B2Q96RD2 323 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 TAPBPLQ9BX59 468 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 POTEKPQ9BYX7 375 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 SMDT1Q9H4I9 107 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 METTL8Q9H825 291 aaKnown RBP1.13□□□□□ -2.23
SCFD1-214ENST00000554819 TXNL4BQ9NX01 149 aaKnown RBP1.13□□□□□ -2.23
SCFD1-214ENST00000554819 USH1CQ9Y6N9 552 aa1.13□□□□□ -2.23
SCFD1-214ENST00000554819 MYO15BQ96JP2 1530 aa1.12□□□□□ -2.23
SCFD1-214ENST00000554819 IGKV1-12A0A0C4DH73 117 aa1.12□□□□□ -2.23
SCFD1-214ENST00000554819 PSMD11O00231 422 aa1.12□□□□□ -2.23
SCFD1-214ENST00000554819 IGKV1D-12P01611 117 aa1.12□□□□□ -2.23
SCFD1-214ENST00000554819 AKR1C4P17516 323 aa1.12□□□□□ -2.23
SCFD1-214ENST00000554819 PTNP21246 168 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms