RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ARL11Q969Q4 196 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 RPEQ96AT9 228 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 MGLLQ99685 303 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 MMP28Q9H239 520 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 RANBP3Q9H6Z4 567 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-213ENST00000554600 ZNF696Q9H7X3 374 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 PLGRKTQ9HBL7 147 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 ISYNA1Q9NPH2 558 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 FBLN5Q9UBX5 448 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 TRAPPC2LQ9UL33 140 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 IGHV3-43A0A0B4J1X8 118 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 A0A1W2PPE3 182 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 BUB1B-PAK6H3BSN5 160 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 J3QR06 171 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 M0QZ24 198 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 SDCBPO00560 298 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-213ENST00000554600 ARL6IP5O75915 188 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 IGLV1-47P01700 117 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 UCHL1P09936 223 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 UBBP0CG47 229 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 CGB3P0DN86 165 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 CGB7P0DN87 165 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 IGHV3-43DP0DP04 118 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 VSIG10L2P0DP72 767 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 CPEP16870 476 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 GZMHP20718 246 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 FUT3P21217 361 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 PSMA1P25786 263 aaKnown RBP8.58□□□□□ -1.04
SHMT2-213ENST00000554600 HTR2CP28335 458 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 KIR2DS4P43632 304 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 DYNLT3P51808 116 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 GP2P55259 537 aaKnown RBP8.58□□□□□ -1.04
SHMT2-213ENST00000554600 PAX5Q02548 391 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 UTF1Q5T230 341 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 TPTE2P1Q5T6R2 138 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 OR10K2Q6IF99 312 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 CCBE1Q6UXH8 406 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-213ENST00000554600 ZNF497Q6ZNH5 498 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 Q6ZTK2 550 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 C11orf44Q8N8P7 122 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 DTX3Q8N9I9 347 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 OR10X1Q8NGY0 326 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 OR4K15Q8NH41 348 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 Q96M66 194 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 NEDD4LQ96PU5 975 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 CITED1Q99966 193 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 TMEM59Q9BXS4 323 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 PRSS22Q9GZN4 317 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 KCNK15Q9H427 330 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 GHRLQ9UBU3 117 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 PSG11Q9UQ72 335 aa8.58□□□□□ -1.04
SHMT2-213ENST00000554600 TGP01266 2768 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 NOTCH1P46531 2555 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 A0A087X0M5 115 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 A0A1B0GX30 115 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A10PA6NDY2 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A18PA6NE21 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A16PA6NEW6 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A20PA6NIJ5 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A7PA6NKC0 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A22PA8MWA6 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A12PA8MX19 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A5PA8MXJ8 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A23PA8MXZ1 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 NPIPB11E5RHQ5 1161 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 SPINT2O43291 252 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 DENRO43583 198 aaKnown RBP8.57□□□□□ -1.04
SHMT2-213ENST00000554600 PDCD6O75340 191 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 SC5DO75845 299 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 MT-ND4P03905 459 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A15PP0C7V4 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A13PP0C7W8 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A14PP0C7W9 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 FAM90A24PP0C7X0 464 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 CALRP27797 417 aaKnown RBP8.57□□□□□ -1.04
SHMT2-213ENST00000554600 MADCAM1Q13477 382 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 HABP2Q14520 560 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-213ENST00000554600 P2RY14Q15391 338 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 TBCEQ15813 527 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-213ENST00000554600 PRR31Q5SQ13 230 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 C1orf100Q5SVJ3 147 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 C6orf183Q5T699 404 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 SYT6Q5T7P8 510 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-213ENST00000554600 CCDC144NLQ6NUI1 221 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 TMEM91Q6ZNR0 172 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 ZNF367Q7RTV3 350 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 LYPD6Q86Y78 171 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 KLHDC1Q8N7A1 406 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 OR10A7Q8NGE5 316 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 KCNG3Q8TAE7 436 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 AKR1E2Q96JD6 320 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 RAB9BQ9NP90 201 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 RCC2Q9P258 522 aaKnown RBP8.57□□□□□ -1.04
SHMT2-213ENST00000554600 AK6Q9Y3D8 172 aaKnown RBP8.57□□□□□ -1.04
SHMT2-213ENST00000554600 PLXNB1O43157 2135 aa8.57□□□□□ -1.04
SHMT2-213ENST00000554600 NOTCH3Q9UM47 2321 aa8.56□□□□□ -1.04
SHMT2-213ENST00000554600 OOSP1A8MZH6 123 aa8.56□□□□□ -1.04
SHMT2-213ENST00000554600 ORC5O43913 435 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms