RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CENPOQ9BU64 300 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 LPAR5Q9H1C0 372 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 MEGF9Q9H1U4 602 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 DPAGT1Q9H3H5 408 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 ZMAT3Q9HA38 289 aaKnown RBP8.65□□□□□ -1.02
PTCH1-225ENST00000551845 RAB9BQ9NP90 201 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 CALYQ9NYX4 217 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 KCNIP1Q9NZI2 227 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 TRAV39A0A0B4J263 110 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 TMEM272A0A1B0GTI8 110 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 NPIPB11E5RHQ5 1161 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 LDLRAD4O15165 306 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 IL1AP01583 271 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 MELTFP08582 738 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 NFYBP25208 207 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 IER3P46695 156 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 VEGFCP49767 419 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 UBA52P62987 128 aaKnown RBP8.64□□□□□ -1.03
PTCH1-225ENST00000551845 MXD1Q05195 221 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 PRAMEF5Q5TYX0 476 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 C16orf87Q6PH81 154 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 SLC16A12Q6ZSM3 486 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 C6orf201Q7Z4U5 140 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 TMEM86BQ8N661 226 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 OR56B1Q8NGI3 324 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 OR4K15Q8NH41 348 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 ZNF596Q8TC21 504 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 SSMEM1Q8WWF3 244 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 ARL11Q969Q4 196 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 PTX4Q96A99 478 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 DUX5Q96PT3 197 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 NICN1Q9BSH3 213 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 CLEC7AQ9BXN2 247 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 RIMS4Q9H426 269 aaPredicted RBP8.64□□□□□ -1.03
PTCH1-225ENST00000551845 KCNK15Q9H427 330 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 RNF167Q9H6Y7 350 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 LINC00574Q9H8X3 128 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 LIN7BQ9HAP6 207 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 ESM1Q9NQ30 184 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 IDI2-AS1Q9NZ38 188 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 DAPK2Q9UIK4 370 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 HSF4Q9ULV5 492 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 TBL2Q9Y4P3 447 aaKnown RBP8.64□□□□□ -1.03
PTCH1-225ENST00000551845 POMT1Q9Y6A1 747 aa8.64□□□□□ -1.03
PTCH1-225ENST00000551845 A0A087X0M5 115 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 IGHV2-26A0A0B4J1V2 119 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 A0A1B0GX30 115 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 SMIM30A4D0T7 59 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 BTBD17A6NE02 478 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 DNAJC9-AS1A6NH13 148 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 SOCS1O15524 211 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 TMEM127O75204 238 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 SLC2A2P11168 524 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-225ENST00000551845 RAB6AP20340 208 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 HTR1DP28221 377 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 CHATP28329 748 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 LSM3P62310 102 aaKnown RBP8.63□□□□□ -1.03
PTCH1-225ENST00000551845 LTC4SQ16873 150 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 C6orf183Q5T699 404 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 MINOS1Q5TGZ0 78 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 ZNF626Q68DY1 528 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 TRAT1Q6PIZ9 186 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 NR2C2APQ86WQ0 139 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 LDLRAD3Q86YD5 345 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 CROCCP3Q8IVE0 287 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 GAPTQ8N292 157 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-225ENST00000551845 BEND2Q8NDZ0 799 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 OR9G1Q8NH87 305 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 SGMS2Q8NHU3 365 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 DYRK2Q92630 601 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 KIRREL1Q96J84 757 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 SULT4A1Q9BR01 284 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 FUNDC2Q9BWH2 189 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 MRPS26Q9BYN8 205 aaKnown RBP8.63□□□□□ -1.03
PTCH1-225ENST00000551845 TNFRSF19Q9NS68 423 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 MINOS1-NBL1R4GNA1 71 aa8.63□□□□□ -1.03
PTCH1-225ENST00000551845 ODF3BA8MYP8 253 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 LEUTXA8MZ59 168 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 C15orf65H3BRN8 121 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 SPINT2O43291 252 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 CRYBA1P05813 215 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
PTCH1-225ENST00000551845 CLEC2LP0C7M8 214 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 CD34P28906 385 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 SSTR5P35346 364 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 GDNFP39905 211 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 TMEM50BP56557 158 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 MRPS15P82914 257 aaKnown RBP8.62□□□□□ -1.03
PTCH1-225ENST00000551845 SSX2Q16385 188 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 AANATQ16613 207 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 IDNKQ5T6J7 187 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 SFXN4Q6P4A7 337 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 LHFPL4Q7Z7J7 247 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 ZNF554Q86TJ5 538 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 OR52M1Q8NGK5 317 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 OR13F1Q8NGS4 319 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 OR5R1Q8NH85 324 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 NDNFQ8TB73 568 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms