RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 UNC119Q13432 240 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 NKAPLQ5M9Q1 402 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 C6orf183Q5T699 404 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 SYT6Q5T7P8 510 aaPredicted RBP21.04■□□□□ 0.96
CPSF6-205ENST00000550075 CREB3L1Q96BA8 519 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 TM2D1Q9BX74 207 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 ABCB10Q9NRK6 738 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 A0A087WXM4 84 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 A0A087X0M5 115 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 A0A1B0GX30 115 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 MT-ND4P03905 459 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 RAB3BP20337 219 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 SSTR5P35346 364 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 GDNFP39905 211 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 PRRX1P54821 245 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 QRFPP83859 136 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 AWAT1Q58HT5 328 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 TRAT1Q6PIZ9 186 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 KCNK15Q9H427 330 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 ZNF286AQ9HBT8 521 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 STEAP1Q9UHE8 339 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 TRAPPC2LQ9UL33 140 aa21.03■□□□□ 0.96
CPSF6-205ENST00000550075 FAM172BPA6NC97 362 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 NPIPB11E5RHQ5 1161 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 ORC5O43913 435 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 CHATP28329 748 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 CEACAM3P40198 252 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 ARHGDIBP52566 201 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 FAM189A2Q15884 450 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 SSX2Q16385 188 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 SIGIRRQ6IA17 410 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 DHRS7BQ6IAN0 325 aaPredicted RBP21.02■□□□□ 0.96
CPSF6-205ENST00000550075 OR4P4Q8NGL7 312 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 OR4F5Q8NH21 305 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 OR9G1Q8NH87 305 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 FAM3DQ96BQ1 224 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 DPM3Q9P2X0 92 aa21.02■□□□□ 0.96
CPSF6-205ENST00000550075 AMMECR1Q9Y4X0 333 aaPredicted RBP21.02■□□□□ 0.96
CPSF6-205ENST00000550075 TRAV39A0A0B4J263 110 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 UBE2QL1A1L167 161 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 VGLL3A8MV65 326 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 TMEM30BQ3MIR4 351 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 HES5Q5TA89 166 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 BAIAP2L2Q6UXY1 529 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 SLC16A12Q6ZSM3 486 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 GAPTQ8N292 157 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 C3orf56Q8N813 242 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 TSPAN14Q8NG11 270 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 OR51D1Q8NGF3 324 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 RFESDQ8TAC1 157 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 CCDC107Q8WV48 283 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 ARL11Q969Q4 196 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 RAB18Q9NP72 206 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 TXNL4BQ9NX01 149 aaKnown RBP21.01■□□□□ 0.95
CPSF6-205ENST00000550075 FBLN5Q9UBX5 448 aa21.01■□□□□ 0.95
CPSF6-205ENST00000550075 A0A1B0GUS0 222 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 SPINT2O43291 252 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 NDUFA7O95182 113 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 IGLV1-47P01700 117 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 RAG2P55895 527 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 LTC4SQ16873 150 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 HLA-DRB5Q30154 266 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 LIAT1Q6ZQX7 453 aa21■□□□□ 0.95
CPSF6-205ENST00000550075 ANK2Q01484 3957 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 IFITM5A6NNB3 132 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 LEUTXA8MZ59 168 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 CFPP27918 469 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 BLVRBP30043 206 aaPredicted RBP20.99■□□□□ 0.95
CPSF6-205ENST00000550075 CLDN12P56749 244 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 PLA1AQ53H76 456 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 OR52M1Q8NGK5 317 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 OR4K15Q8NH41 348 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 NICN1Q9BSH3 213 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 LPAR5Q9H1C0 372 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 C1RLQ9NZP8 487 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 PITPNC1Q9UKF7 332 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 HILPDAQ9Y5L2 63 aa20.99■□□□□ 0.95
CPSF6-205ENST00000550075 SHISA3A0PJX4 238 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 F2RL2O00254 374 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 PAX6P26367 422 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 DYNLT3P51808 116 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 OR10A3P58181 314 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 LY6EQ16553 131 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 TIMM50Q3ZCQ8 353 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 ZNF554Q86TJ5 538 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 TPRA1Q86W33 373 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 DYNAPQ8N1N2 210 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 KCTD7Q96MP8 289 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 MMP28Q9H239 520 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 ZNF696Q9H7X3 374 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 BEX1Q9HBH7 125 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 PLEKHJ1Q9NW61 149 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 KCNIP1Q9NZI2 227 aa20.98■□□□□ 0.95
CPSF6-205ENST00000550075 C15orf65H3BRN8 121 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 SDCBPO00560 298 aaPredicted RBP20.97■□□□□ 0.95
CPSF6-205ENST00000550075 CD36P16671 472 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 C2orf76Q3KRA6 126 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 LDLRAD2Q5SZI1 272 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 CCDC144NLQ6NUI1 221 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 C6orf201Q7Z4U5 140 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms