RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 CD200P41217 278 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 MAGEA5P43359 124 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 MEOX1P50221 254 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 TGFBR3Q03167 851 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 TBC1D28Q2M2D7 210 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 MST1LQ2TV78 715 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 EIF2S3LQ2VIR3 472 aaKnown RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 HFEQ30201 348 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 FAM76BQ5HYJ3 339 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 PXDC1Q5TGL8 231 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 HES3Q5TGS1 186 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 FBXW9Q5XUX1 488 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 DHRS7BQ6IAN0 325 aaPredicted RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 IGFL2Q6UWQ7 119 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 DPPA3Q6W0C5 159 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 CALHM1Q8IU99 346 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 CMTM1Q8IZ96 169 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 FAM169BQ8N8A8 192 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 RELL2Q8NC24 303 aaPredicted RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 BPIFCQ8NFQ6 507 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 PCNPQ8WW12 178 aaKnown RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 MAFIPQ8WZ33 124 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 OR5P3Q8WZ94 311 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 MRPL24Q96A35 216 aaKnown RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 LRRC46Q96FV0 321 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 TSNAXQ99598 290 aaKnown RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 RTL8AQ9BWD3 113 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 C1QTNF6Q9BXI9 259 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 TLNRD1Q9H1K6 362 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 LIME1Q9H400 295 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 ZNF442Q9H7R0 627 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 TMEM9BQ9NQ34 198 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 LYRM2Q9NU23 88 aaPredicted RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 LIN7CQ9NUP9 197 aaKnown RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 MMP24Q9Y5R2 645 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 KLF2Q9Y5W3 355 aaPredicted RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 KPTNQ9Y664 436 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 SDK2Q58EX2 2172 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 AHCTF1Q8WYP5 2266 aa4.52□□□□□ -1.69
KRR1-203ENST00000550023 NCOA6Q14686 2063 aaPredicted RBP4.52□□□□□ -1.69
KRR1-203ENST00000550023 C5orf49A4QMS7 147 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 ZNF705EA8MWA4 302 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 CDRT15L2A8MXV6 281 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 IQCF6A8MYZ5 107 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 C22orf46C9J442 243 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 FAM90A26D6RGX4 464 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 TRAPPC2LH3BP13 241 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 K7N7A8 449 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 DNASE2O00115 360 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 AQP7O14520 342 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 CDX4O14627 284 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 SMAD7O15105 426 aaKnown RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 PHF1O43189 567 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 SMPD2O60906 423 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 NDUFS6O75380 124 aaKnown RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 MED6O75586 246 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 SCO1O75880 301 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 NUDT3O95989 172 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 HLA-HP01893 362 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 APOC3P02656 99 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 MBPP02686 304 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 CD5P06127 495 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 THBDP07204 575 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 HOXB5P09067 269 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 ZNF806P0C7X5 589 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 DANCRP0C864 163 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 ZNF14P17017 642 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 PVALBP20472 110 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 BCL3P20749 454 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 ITGA3P26006 1051 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 WNT5AP41221 380 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 LPAR6P43657 344 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 HAAOP46952 286 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 DVL1P1P54792 670 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 TMEM33P57088 247 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 ERVK11-1P61568 191 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 EWSR1Q01844 656 aaKnown RBP eCLIP4.51□□□□□ -1.69
KRR1-203ENST00000550023 PLGLB1Q02325 96 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 MRPL49Q13405 166 aaKnown RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 HERPUD1Q15011 391 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 ZNF146Q15072 292 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 C3orf36Q3SXR2 165 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 MIDNQ504T8 468 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 RPL7L1Q6DKI1 246 aaKnown RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 SPINK14Q6IE38 97 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 FAM122CQ6P4D5 195 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 FIP1L1Q6UN15 594 aaKnown RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 BTNL8Q6UX41 500 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 UNQ6126/PRO20091Q6UXV3 157 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 PIP4P1Q86T03 277 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 MCEMP1Q8IX19 187 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 TUSC5Q8IXB3 177 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 H1FOOQ8IZA3 346 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 PUSL1Q8N0Z8 303 aaKnown RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 SLC35G3Q8N808 338 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 BHLHE23Q8NDY6 225 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 LILRB1Q8NHL6 650 aaPredicted RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 FGFBP3Q8TAT2 258 aa4.51□□□□□ -1.69
KRR1-203ENST00000550023 MRPL30Q8TCC3 161 aaKnown RBP4.51□□□□□ -1.69
KRR1-203ENST00000550023 GLYATL2Q8WU03 294 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms