RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 KIR2DS1Q14954 304 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 KISS1Q15726 138 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 PIGYQ3MUY2 71 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 KLHL22Q53GT1 634 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 SAXO1Q8IYX7 474 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 OR8H3Q8N146 312 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 PARP16Q8N5Y8 322 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 Q8N9W7 124 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 OR51T1Q8NGJ9 327 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 OR8U1Q8NH10 309 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 CNIH3Q8TBE1 160 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 CCDC107Q8WV48 283 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 TSEN15Q8WW01 171 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 APH1BQ8WW43 257 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 GPER1Q99527 375 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 MRPS18AQ9NVS2 196 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 ZNF581Q9P0T4 197 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 SCOCQ9UIL1 159 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 DHDHQ9UQ10 334 aa9.37□□□□□ -0.91
TRAFD1-205ENST00000548277 ZNF736B4DX44 427 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 AP4M1O00189 453 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 HTR3BO95264 441 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 GAPDHP04406 335 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 RPSAP08865 295 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 SOX2P48431 317 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 MTNR1BP49286 362 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 GP2P55259 537 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 ZP1P60852 638 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 MRPL28Q13084 256 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 SMN1Q16637 294 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 ZNF691Q5VV52 312 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 RSBN1Q5VWQ0 802 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 OVCH2Q7RTZ1 564 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 OR11H1Q8NG94 326 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 OR2T10Q8NGZ9 312 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 OR5B12Q96R08 314 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 RASL11BQ9BPW5 248 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 FAM192AQ9GZU8 254 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 ABCG5Q9H222 651 aa9.36□□□□□ -0.91
TRAFD1-205ENST00000548277 NPIPB11E5RHQ5 1161 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 RAB3AP20336 220 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 RSU1Q15404 277 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 CASC10Q5T4H9 136 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 TGIF2LXQ8IUE1 241 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 SUMF2Q8NBJ7 301 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 ZNF555Q8NEP9 628 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 OR51A2Q8NGJ7 313 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 TNFAIP8L1Q8WVP5 186 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 RGP1Q92546 391 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 HSPB9Q9BQS6 159 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 FGF20Q9NP95 211 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 LIN7CQ9NUP9 197 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 ING4Q9UNL4 249 aa9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 ZNF256Q9Y2P7 627 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-205ENST00000548277 SDCBPO00560 298 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 MAGEB3O15480 346 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 CDRT1O95170 752 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 SLC2A2P11168 524 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 CDX1P47902 265 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 ETV1P50549 477 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 F2RL1P55085 397 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 ZNF816Q0VGE8 651 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 FOXE3Q13461 319 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 EBI3Q14213 229 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 OR2G6Q5TZ20 316 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 XAF1Q6GPH4 301 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 ELP2Q6IA86 826 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 RPL22L1Q6P5R6 122 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 PXT1Q8NFP0 134 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 MUC7Q8TAX7 377 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 ARL11Q969Q4 196 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 S1PR3Q99500 378 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 DPCDQ9BVM2 203 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 JAM3Q9BX67 310 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 GON7Q9BXV9 100 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 SMPD3Q9NY59 655 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 SMAD5-AS1Q9Y6J3 95 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 TENM3Q9P273 2699 aa9.34□□□□□ -0.91
TRAFD1-205ENST00000548277 GABRPO00591 440 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 SLC31A2O15432 143 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 RRP9O43818 475 aaKnown RBP9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 MOSP00540 346 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 ELANEP08246 267 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 VDAC1P21796 283 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 MYF6P23409 242 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 DCKP27707 260 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 CCDC58Q4VC31 144 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 ATAD3CQ5T2N8 411 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 ZNF529Q6P280 563 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 TMPRSS11AQ6ZMR5 421 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 Q8N6K4 173 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 GPR148Q8TDV2 347 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 NEK7Q8TDX7 302 aa9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 CPNE2Q96FN4 548 aaPredicted RBP9.33□□□□□ -0.92
TRAFD1-205ENST00000548277 KCTD7Q96MP8 289 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms