RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	OR2V1	Q8NHB1	315 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	RHBDD1	Q8TEB9	315 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374		Q8WTZ3	238 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	HPSE2	Q8WWQ2	592 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	RBMXL1	Q96E39	390 aa	Known RBP	11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	TMEM222	Q9H0R3	208 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	UFSP2	Q9NUQ7	469 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	GAR1	Q9NY12	217 aa	Known RBP	11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	OR1A1	Q9P1Q5	309 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	UBE2L5P	A0A1B0GUS4	154 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	SMCO3	A2RU48	225 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	OR6C6	A6NF89	314 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	CEACAM18	A8MTB9	384 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	COX6A1	P12074	109 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	H3F3A	P84243	136 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	DEFA6	Q01524	100 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	HIST3H3	Q16695	136 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	GGACT	Q9BVM4	153 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	BOD1L1	Q8NFC6	3051 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	LOC400499	M0QZD8	3231 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	SMIM6	P0DI80	62 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	LYL1	P12980	280 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	DTYMK	P23919	212 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	TLE4	Q04727	773 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	FADS6	Q8N9I5	356 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	RFESD	Q8TAC1	157 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	TMEM54	Q969K7	222 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	CXorf65	A6NEN9	183 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	SLC22A20	A6NK97	555 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	LILRA1	O75019	489 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	CD200	P41217	278 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	CEBPD	P49716	269 aa	Predicted RBP	11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	IDH3G	P51553	393 aa	Predicted RBP	11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	ERVFRD-1	P60508	538 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	PCBD1	P61457	104 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	SELENOH	Q8IZQ5	122 aa	Known RBP	11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	TPRX1	Q8N7U7	411 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF610	Q8N9Z0	462 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	GINS3	Q9BRX5	216 aa		11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	HEATR1	Q9H583	2144 aa	Known RBP	11.15	□□□□□ -0.62
BRF1-210	ENST00000547374	PHOX2A	O14813	284 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	EXT1	Q16394	746 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	RNF212	Q495C1	297 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	HIKESHI	Q53FT3	197 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	SLC25A53	Q5H9E4	307 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	C10orf128	Q5T292	105 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	ZDHHC23	Q8IYP9	409 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	TDH	Q8IZJ6	230 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374	SLC25A22	Q9H936	323 aa		11.15	□□□□□ -0.63
BRF1-210	ENST00000547374		A0A0G2JRQ6	117 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	DEFB108A	A8MXU0	73 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	RHBDL1	O75783	438 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	HEXA	P06865	529 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	ERVS71-1	P61550	626 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	KCNMB1	Q16558	191 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	TVP23C	Q96ET8	276 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	C18orf12	Q96KH6	178 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	CABLES2	Q9BTV7	478 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	DEFB127	Q9H1M4	99 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	DEPP	Q9NTK1	212 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	PSENEN	Q9NZ42	101 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	FZR1	Q9UM11	496 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374		A0A087WZY1	265 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	PINLYP	A6NC86	204 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	DEGS1	O15121	323 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	SYNGR4	O95473	234 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374		Q6ZPA2	131 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	SSX9	Q7RTT3	188 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	ANGPTL4	Q9BY76	406 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	UNKL	Q9H9P5	680 aa	Known RBP	11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	MTCH1	Q9NZJ7	389 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	MED12L	Q86YW9	2145 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	ANKRD30BL	A7E2S9	258 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	LFNG	Q8NES3	379 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	LHX4	Q969G2	390 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	GALNT14	Q96FL9	552 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	TCEAL7	Q9BRU2	100 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	RPRM	Q9NS64	109 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	SLC39A9	Q9NUM3	307 aa		11.14	□□□□□ -0.63
BRF1-210	ENST00000547374	hCG_38984	A0A1B0GV85	526 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374		A0A1W2PPQ1	181 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374		K7N7A8	449 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	PGA5	P0DJD9	388 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	EGR1	P18146	543 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	MRPL14	Q6P1L8	145 aa	Known RBP	11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	C20orf204	Q6ZNR8	217 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	PROK2	Q9HC23	129 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	ANAPC10	Q9UM13	185 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	IGHV3-43	A0A0B4J1X8	118 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	KLF7	O75840	302 aa	Predicted RBP	11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	IGHV3-43D	P0DP04	118 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	VDAC1	P21796	283 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	CRYGS	P22914	178 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	UBE2G2	P60604	165 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	BTNL3	Q6UXE8	466 aa		11.13	□□□□□ -0.63
BRF1-210	ENST00000547374	GCNT2	Q8N0V5	402 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms