RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RPUSD1Q9UJJ7 312 aaKnown RBP5.22□□□□□ -1.57
PRKDC-211ENST00000546304 KCNS2Q9ULS6 477 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 ETV7Q9Y603 341 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 CEPT1Q9Y6K0 416 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 CUBNO60494 3623 aa5.21□□□□□ -1.57
PRKDC-211ENST00000546304 SMIM31A0A1B0GVY4 71 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 ODAMA1E959 279 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 H3BUI4 141 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF701M0R085 212 aaPredicted RBP5.21□□□□□ -1.58
PRKDC-211ENST00000546304 MGST3O14880 152 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 LY6G6DO95868 133 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 PAHP00439 452 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 GATA3P23771 443 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 CHATP28329 748 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 GLP1RP43220 463 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 EFNB2P52799 333 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 RPL31P62899 125 aaKnown RBP5.21□□□□□ -1.58
PRKDC-211ENST00000546304 PAX5Q02548 391 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 PAX2Q02962 417 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 FAM189A2Q15884 450 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 C2orf76Q3KRA6 126 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 ATAD3CQ5T2N8 411 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 SIGIRRQ6IA17 410 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 RAB12Q6IQ22 244 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 METAP1DQ6UB28 335 aaPredicted RBP5.21□□□□□ -1.58
PRKDC-211ENST00000546304 BTNL3Q6UXE8 466 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 TCF23Q7RTU1 214 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 RTN4RL2Q86UN3 420 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 FAM185AQ8N0U4 392 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 KIR3DL3Q8N743 410 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 TPRX1Q8N7U7 411 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 SUMF2Q8NBJ7 301 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 OR56B1Q8NGI3 324 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 OR5D13Q8NGL4 314 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 AP3S1Q92572 193 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 PTX4Q96A99 478 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 SLC25A38Q96DW6 304 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 COQ2Q96H96 371 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 NUDT16L1Q9BRJ7 211 aaKnown RBP5.21□□□□□ -1.58
PRKDC-211ENST00000546304 BARHL1Q9BZE3 327 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 SHARPINQ9H0F6 387 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 MMP26Q9NRE1 261 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 RHBDL2Q9NX52 303 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 CCDC59Q9P031 241 aaKnown RBP5.21□□□□□ -1.58
PRKDC-211ENST00000546304 ABRACLQ9P1F3 81 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 ONECUT1Q9UBC0 465 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 LPAR3Q9UBY5 353 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 RSL24D1Q9UHA3 163 aaKnown RBP5.21□□□□□ -1.58
PRKDC-211ENST00000546304 RAB22AQ9UL26 194 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 INSIG2Q9Y5U4 225 aa5.21□□□□□ -1.58
PRKDC-211ENST00000546304 ATRQ13535 2644 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 hADV38S2A0JD32 116 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 TMEM30CPA0ZSE6 113 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 MEX3AA1L020 520 aaKnown RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 FUOMA2VDF0 154 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 METTL21EPA6NDL7 271 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 FOXI3A8MTJ6 420 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 A8MV72 311 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 J3QLI3 93 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 SCGNO76038 276 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 LIPFP07098 398 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 PPIAL4GP0DN37 164 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 FUT3P21217 361 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 ERP29P30040 261 aaKnown RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 BLVRBP30043 206 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 SOX6P35712 828 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 VEGFCP49767 419 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 RORCP51449 518 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 MEF2CQ06413 473 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 AESQ08117 197 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 DYNC1I2Q13409 638 aaKnown RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 RBM39Q14498 530 aaKnown RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF273Q14593 569 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 KRBOX4Q5JUW0 171 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 UBE2NLQ5JXB2 153 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 METTL11BQ5VVY1 283 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 RSBN1Q5VWQ0 802 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-211ENST00000546304 C6orf201Q7Z4U5 140 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 TRAPPC6BQ86SZ2 158 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 CMTM4Q8IZR5 234 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 BPIFB2Q8N4F0 458 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 FAM89BQ8N5H3 189 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 SAMD12Q8N8I0 201 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 LY6G5BQ8NDX9 201 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 OR4M1Q8NGD0 313 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 OR5H6Q8NGV6 325 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 PLPPR1Q8TBJ4 325 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 DYNC2LI1Q8TCX1 351 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 RAB40AQ8WXH6 277 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 DYRK2Q92630 601 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 CYYR1Q96J86 154 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 NEDD4LQ96PU5 975 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 SULT4A1Q9BR01 284 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 DCUN1D5Q9BTE7 237 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 C12orf4Q9NQ89 552 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 YAE1D1Q9NRH1 226 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 ING3Q9NXR8 418 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 ETAA1Q9NY74 926 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 KIF25Q9UIL4 384 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 SPATA2Q9UM82 520 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms