RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 AVPI1Q5T686 147 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 STEAP4Q687X5 459 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 CLEC6AQ6EIG7 209 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 KCNIP4Q6PIL6 250 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 COMMD6Q7Z4G1 85 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 MTERF4Q7Z6M4 381 aaKnown RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 OR10G4Q8NGN3 311 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 TRIM44Q96DX7 344 aaPredicted RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 ARL5BQ96KC2 179 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 SERPINI1Q99574 410 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 TBL1XR1Q9BZK7 514 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 SHCBP1LQ9BZQ2 653 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 REEP4Q9H6H4 257 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 UBQLN4Q9NRR5 601 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 THUMPD1Q9NXG2 353 aaKnown RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 CALYQ9NYX4 217 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 EMC3Q9P0I2 261 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 MYEF2Q9P2K5 600 aaKnown RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 NOSIPQ9Y314 301 aaKnown RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM14AQ9Y6G1 99 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF816-ZNF321PA0A0X1KG74 233 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 NCF1BA6NI72 391 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 NCF1CA8MVU1 366 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 H0YHG0 523 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 RNASEK-C17orf49H0YIS7 233 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 KCNK2O95069 426 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 FSTL3O95633 263 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 CRYBA1P05813 215 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 NCF1P14598 390 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF250P15622 560 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 TCN1P20061 433 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 IVDP26440 423 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 GABRA3P34903 492 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 ARR3P36575 388 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 NCBP2P52298 156 aaKnown RBP eCLIP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 PSMD4P55036 377 aaKnown RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 LCN2P80188 198 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 DDX39BQ13838 428 aaKnown RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 MAD2L1BPQ15013 274 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM155Q4W5P6 130 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 SPANXN3Q5MJ09 141 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 C9orf135Q5VTT2 229 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 PLBD1Q6P4A8 553 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 SASS6Q6UVJ0 657 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 PAGE2Q7Z2X7 111 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 LRRC28Q86X40 367 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 VSTM4Q8IW00 320 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 UBE2J2Q8N2K1 259 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 OR52E2Q8NGJ4 325 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 PIGXQ8TBF5 258 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 SPRYD4Q8WW59 207 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 CERS2Q96G23 380 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 CENPKQ9BS16 269 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 ANP32EQ9BTT0 268 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 LINC00470Q9BZP3 86 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 C12orf10Q9HB07 376 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM165Q9HC07 324 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 DYNLRB1Q9NP97 96 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 PSME2Q9UL46 239 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 PACSIN2Q9UNF0 486 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-224ENST00000545688 RNF11Q9Y3C5 154 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 HDGFL3Q9Y3E1 203 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 OR10H1Q9Y4A9 318 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF780BQ9Y6R6 833 aa1.94□□□□□ -2.1
SNHG1-224ENST00000545688 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
SNHG1-224ENST00000545688 IGHV1-69-2A0A0G2JMI3 117 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 CLDN25C9JDP6 229 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 F8WDY8 70 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 GMFGO60234 142 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 EIF4E2O60573 245 aaKnown RBP1.93□□□□□ -2.1
SNHG1-224ENST00000545688 SCGB2A1O75556 95 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 UPK3AO75631 287 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 CDRT1O95170 752 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 IGHV1-8P0DP01 117 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 FKBP2P26885 142 aaKnown RBP1.93□□□□□ -2.1
SNHG1-224ENST00000545688 GCAP28676 217 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 MPIP34949 423 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 ATP6V0D1P61421 351 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 CCL8P80075 99 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 EMX1Q04741 257 aaPredicted RBP1.93□□□□□ -2.1
SNHG1-224ENST00000545688 PDZK1IP1Q13113 114 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 SKP2Q13309 424 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 QPRTQ15274 297 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 ZMYND11Q15326 602 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 RAB12Q6IQ22 244 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 C3orf33Q6P1S2 294 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 LRRN1Q6UXK5 716 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 NTM-AS1Q6ZSK4 140 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 LINC00173Q6ZV60 143 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 PEX26Q7Z412 305 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 SLC35F2Q8IXU6 374 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 FAM9CQ8IZT9 166 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 LGI3Q8N145 548 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 Q8N2B8 174 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 TEX9Q8N6V9 391 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 UBL4BQ8N7F7 174 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF283Q8N7M2 679 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 CEP112Q8N8E3 955 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 GATSQ8NAP1 163 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms