RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SSX2Q16385 188 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 HLA-DRB5Q30154 266 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 ZNF773Q6PK81 442 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 SHISA2Q6UWI4 295 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 SLC16A12Q6ZSM3 486 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 KCNG3Q8TAE7 436 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 MRGPRDQ8TDS7 321 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 FAM46BQ96A09 425 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 TM2D1Q9BX74 207 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 TMEM59Q9BXS4 323 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 C16orf95Q9H693 158 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 RANBP3Q9H6Z4 567 aaPredicted RBP10.58□□□□□ -0.72
LTBR-208ENST00000541005 BEX1Q9HBH7 125 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 IDI2-AS1Q9NZ38 188 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 DPM3Q9P2X0 92 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 TCF19Q9Y242 345 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 MGAM2Q2M2H8 2515 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 TRAV1-2A0A0B4J238 106 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 TRDV1A0A1B0GX56 115 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 LY6LH3BQJ8 138 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 C15orf65H3BRN8 121 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 AIPO00170 330 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 ORC5O43913 435 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 CHST1O43916 411 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 PDCD6O75340 191 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 MPIG6BO95866 241 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 RPS27AP62979 156 aaKnown RBP10.57□□□□□ -0.72
LTBR-208ENST00000541005 KCTD21Q4G0X4 260 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 UTF1Q5T230 341 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 OLFML2AQ68BL7 652 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 Q6ZSV7 163 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 OR2W3Q7Z3T1 314 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 OR52M1Q8NGK5 317 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 OR9G1Q8NH87 305 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 LINC01006Q8NI28 216 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 NDNFQ8TB73 568 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 ETAA1Q9NY74 926 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 FBLN5Q9UBX5 448 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 PEX16Q9Y5Y5 336 aa10.57□□□□□ -0.72
LTBR-208ENST00000541005 FAM172BPA6NC97 362 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 A6NDX4 124 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 LEUTXA8MZ59 168 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 OOSP1A8MZH6 123 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 BUB1B-PAK6H3BSN5 160 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 F2RL2O00254 374 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 CCRL2O00421 344 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 CHATP28329 748 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 CEACAM3P40198 252 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 RANBP1P43487 201 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 PSMD7P51665 324 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 PRRX1P54821 245 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 FAM189A2Q15884 450 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 LY6EQ16553 131 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 TMEM30BQ3MIR4 351 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 OR10K2Q6IF99 312 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 BRICD5Q6PL45 260 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 MMP28Q9H239 520 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 ABCB10Q9NRK6 738 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 AK6Q9Y3D8 172 aaKnown RBP10.56□□□□□ -0.72
LTBR-208ENST00000541005 HILPDAQ9Y5L2 63 aa10.56□□□□□ -0.72
LTBR-208ENST00000541005 TET2Q6N021 2002 aaPredicted RBP10.55□□□□□ -0.72
LTBR-208ENST00000541005 TRAV39A0A0B4J263 110 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 J3QR06 171 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 TOR1AO14656 332 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 ARSBP15848 533 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 NFYBP25208 207 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 LOXL3P58215 753 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 PROK1P58294 105 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 RAB11BQ15907 218 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 Q3ZCU0 254 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 C6orf183Q5T699 404 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 TPTE2P1Q5T6R2 138 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 ZNF554Q86TJ5 538 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 KCNK15Q9H427 330 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 PLGRKTQ9HBL7 147 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 RAB9BQ9NP90 201 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 MBNL3Q9NUK0 354 aaKnown RBP10.55□□□□□ -0.72
LTBR-208ENST00000541005 PITPNC1Q9UKF7 332 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 AMMECR1Q9Y4X0 333 aaPredicted RBP10.55□□□□□ -0.72
LTBR-208ENST00000541005 V9GY05 133 aa10.55□□□□□ -0.72
LTBR-208ENST00000541005 A0A0A6YYD4 124 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 SHISA3A0PJX4 238 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 C12orf77C9JDV5 145 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 PDCD5O14737 125 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 LDLRAD4O15165 306 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 MYL9P24844 172 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 PSMB9P28065 219 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 FGF9P31371 208 aaPredicted RBP10.54□□□□□ -0.72
LTBR-208ENST00000541005 ARHGDIBP52566 201 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 P2RY14Q15391 338 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 PLA1AQ53H76 456 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 SYT6Q5T7P8 510 aaPredicted RBP10.54□□□□□ -0.72
LTBR-208ENST00000541005 CCDC144NLQ6NUI1 221 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 CCBE1Q6UXH8 406 aaPredicted RBP10.54□□□□□ -0.72
LTBR-208ENST00000541005 Q8N2B8 174 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 FAM89BQ8N5H3 189 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms