RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 NEK7Q8TDX7 302 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 HILPDAQ9Y5L2 63 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 TRDV1A0A1B0GX56 115 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 CCRL2O00421 344 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 SLC17A2O00624 439 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 CHST1O43916 411 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 FUT3P21217 361 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 NFYBP25208 207 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 PSMB9P28065 219 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 RPS27AP62979 156 aaKnown RBP13.62□□□□□ -0.23
CD9-209ENST00000540891 P2RY14Q15391 338 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 DHRS7BQ6IAN0 325 aaPredicted RBP13.62□□□□□ -0.23
CD9-209ENST00000540891 CCBE1Q6UXH8 406 aaPredicted RBP13.62□□□□□ -0.23
CD9-209ENST00000540891 LINC01006Q8NI28 216 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 NDNFQ8TB73 568 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 ZNF596Q8TC21 504 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 CCDC107Q8WV48 283 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 FCGR1BQ92637 280 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 LEAP2Q969E1 77 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 NICN1Q9BSH3 213 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 TM2D1Q9BX74 207 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 TMEM59Q9BXS4 323 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 ETAA1Q9NY74 926 aa13.62□□□□□ -0.23
CD9-209ENST00000540891 A0A0A6YYD4 124 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 LY6LH3BQJ8 138 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 HAX1O00165 279 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 AIPO00170 330 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 PDCD6O75340 191 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 TSPAN9O75954 239 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 BPNT1O95861 308 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 IGHV3-7P01780 117 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 GLAP06280 429 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 DYNLT3P51808 116 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 RBM39Q14498 530 aaKnown RBP13.61□□□□□ -0.23
CD9-209ENST00000540891 LTC4SQ16873 150 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 KCTD21Q4G0X4 260 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 FAM53AQ6NSI3 398 aaPredicted RBP13.61□□□□□ -0.23
CD9-209ENST00000540891 OR10A7Q8NGE5 316 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 OR4K15Q8NH41 348 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 KCNG3Q8TAE7 436 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 UBALD1Q8TB05 177 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 BEX1Q9HBH7 125 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 PLGRKTQ9HBL7 147 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 DPM3Q9P2X0 92 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 TCF19Q9Y242 345 aa13.61□□□□□ -0.23
CD9-209ENST00000540891 TRAV1-2A0A0B4J238 106 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 UBE2QL1A1L167 161 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 CLPSL1A2RUU4 121 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 A6NDX4 124 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 BUB1B-PAK6H3BSN5 160 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 ORC5O43913 435 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 GZMHP20718 246 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 GALP22466 123 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 CHATP28329 748 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 CLDN12P56749 244 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 OR10A3P58181 314 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 NKAPLQ5M9Q1 402 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 SYT6Q5T7P8 510 aaPredicted RBP13.6□□□□□ -0.23
CD9-209ENST00000540891 OLFML2AQ68BL7 652 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 OR9G1Q8NH87 305 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 ARL11Q969Q4 196 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 SULT4A1Q9BR01 284 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 LPAR5Q9H1C0 372 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 MMP28Q9H239 520 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 C16orf95Q9H693 158 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 PSG11Q9UQ72 335 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 V9GY05 133 aa13.6□□□□□ -0.23
CD9-209ENST00000540891 A0A1B0GUS0 222 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 LEUTXA8MZ59 168 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 C12orf77C9JDV5 145 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 J3QR06 171 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 TOR1AO14656 332 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 ARSBP15848 533 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 LOXL3P58215 753 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 RAB11BQ15907 218 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 C22orf42Q6IC83 251 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 OR2W3Q7Z3T1 314 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 C6orf201Q7Z4U5 140 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 OR51D1Q8NGF3 324 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 MRPL30Q8TCC3 161 aaKnown RBP13.59□□□□□ -0.23
CD9-209ENST00000540891 WFDC12Q8WWY7 111 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 TRAPPC2LQ9UL33 140 aa13.59□□□□□ -0.23
CD9-209ENST00000540891 FOXI3A8MTJ6 420 aaPredicted RBP13.58□□□□□ -0.24
CD9-209ENST00000540891 F2RL2O00254 374 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 LDLRAD4O15165 306 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 CA11O75493 328 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 RCC1P18754 421 aaPredicted RBP13.58□□□□□ -0.24
CD9-209ENST00000540891 GNG10P50151 68 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 PRRX1P54821 245 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 PROK1P58294 105 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 KRTAP10-3P60369 221 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 SRSF4Q08170 494 aaKnown RBP13.58□□□□□ -0.24
CD9-209ENST00000540891 PLA2G7Q13093 441 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 C2orf76Q3KRA6 126 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 FBLN7Q53RD9 439 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 HES5Q5TA89 166 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms