RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 Q8N9W7 124 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 OR52M1Q8NGK5 317 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 PLPPR1Q8TBJ4 325 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 TNFAIP8L1Q8WVP5 186 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 TSEN15Q8WW01 171 aaKnown RBP9.78□□□□□ -0.84
COPS7A-211ENST00000540408 ARL11Q969Q4 196 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 C4orf36Q96KX1 117 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 S1PR3Q99500 378 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 CHCHD6Q9BRQ6 235 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 GABARAPL3Q9BY60 117 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 FAM192AQ9GZU8 254 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 RYR3Q15413 4870 aa9.78□□□□□ -0.84
COPS7A-211ENST00000540408 TMEM212A6NML5 194 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 SDCBPO00560 298 aaPredicted RBP9.77□□□□□ -0.85
COPS7A-211ENST00000540408 TXNL1O43396 289 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 HTR3BO95264 441 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 IGHG4P01861 327 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 CSTBP04080 98 aaKnown RBP9.77□□□□□ -0.85
COPS7A-211ENST00000540408 MRPL28Q13084 256 aaKnown RBP9.77□□□□□ -0.85
COPS7A-211ENST00000540408 DOC2BQ14184 412 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 CASC10Q5T4H9 136 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 LINC00311Q8N616 119 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 Q8N6K4 173 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 C8orf31Q8N9H6 132 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 SUMF2Q8NBJ7 301 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 OR5AK2Q8NH90 309 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 RTN4IP1Q8WWV3 396 aaPredicted RBP9.77□□□□□ -0.85
COPS7A-211ENST00000540408 PELI1Q96FA3 418 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 S100A13Q99584 98 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 DPCDQ9BVM2 203 aaPredicted RBP9.77□□□□□ -0.85
COPS7A-211ENST00000540408 PALMDQ9NP74 551 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 RAB9BQ9NP90 201 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 ORC6Q9Y5N6 252 aa9.77□□□□□ -0.85
COPS7A-211ENST00000540408 TRAV39A0A0B4J263 110 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 J3QRE1 110 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 OR7C1O76099 320 aaPredicted RBP9.76□□□□□ -0.85
COPS7A-211ENST00000540408 OR8U8P0C7N1 319 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 PIGYQ3MUY2 71 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 SLC25A30Q5SVS4 291 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 LPCAT4Q643R3 524 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 ZNF429Q86V71 674 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 OR10K1Q8NGX5 313 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 NEK7Q8TDX7 302 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 SLC7A6OSQ96CW6 309 aaPredicted RBP9.76□□□□□ -0.85
COPS7A-211ENST00000540408 KCTD7Q96MP8 289 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 ZMAT4Q9H898 229 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 PAK1IP1Q9NWT1 392 aaPredicted RBP9.76□□□□□ -0.85
COPS7A-211ENST00000540408 ST3GAL6Q9Y274 331 aa9.76□□□□□ -0.85
COPS7A-211ENST00000540408 GABRPO00591 440 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 ORC5O43913 435 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 IGF1P05019 195 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 LYL1P12980 280 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 PSMB8P28062 276 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 SNRPGP62308 76 aaKnown RBP9.75□□□□□ -0.85
COPS7A-211ENST00000540408 FHL3Q13643 280 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 GALEQ14376 348 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 Q3ZCU0 254 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 LINC00596Q86U02 117 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 LHFPL3Q86UP9 236 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 SYS1Q8N2H4 156 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 STX19Q8N4C7 294 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 OR1N2Q8NGR9 330 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 CCDC107Q8WV48 283 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 CENPNQ96H22 339 aaPredicted RBP9.75□□□□□ -0.85
COPS7A-211ENST00000540408 UBE2E2Q96LR5 201 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 RCHY1Q96PM5 261 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 ALG8Q9BVK2 526 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 METTL9Q9H1A3 318 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 IFT22Q9H7X7 185 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 PLSCR3Q9NRY6 295 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 OAZ3Q9UMX2 235 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 ING4Q9UNL4 249 aa9.75□□□□□ -0.85
COPS7A-211ENST00000540408 EXOGQ9Y2C4 368 aaKnown RBP9.75□□□□□ -0.85
COPS7A-211ENST00000540408 SPINT2O43291 252 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 CD2P06729 351 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 GBX2P52951 348 aaPredicted RBP9.74□□□□□ -0.85
COPS7A-211ENST00000540408 CFHR3Q02985 330 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 ZNF616Q08AN1 781 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 ATAD3CQ5T2N8 411 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 SBSPONQ8IVN8 264 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 FAM71E2Q8N5Q1 922 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 TMEM104Q8NE00 496 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 OR52N1Q8NH53 320 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 ST6GALNAC6Q969X2 333 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 PDCD1LG2Q9BQ51 273 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 HSPB9Q9BQS6 159 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 GHITMQ9H3K2 345 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 GFOD1Q9NXC2 390 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 ZNF107Q9UII5 783 aaPredicted RBP9.74□□□□□ -0.85
COPS7A-211ENST00000540408 ZNF580Q9UK33 172 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 VSIG4Q9Y279 399 aa9.74□□□□□ -0.85
COPS7A-211ENST00000540408 IGHV3-43A0A0B4J1X8 118 aa9.73□□□□□ -0.85
COPS7A-211ENST00000540408 ZNF736B4DX44 427 aaPredicted RBP9.73□□□□□ -0.85
COPS7A-211ENST00000540408 C15orf65H3BRN8 121 aa9.73□□□□□ -0.85
COPS7A-211ENST00000540408 ZNF780AO75290 641 aaPredicted RBP9.73□□□□□ -0.85
COPS7A-211ENST00000540408 CDRT1O95170 752 aa9.73□□□□□ -0.85
COPS7A-211ENST00000540408 FADS2O95864 444 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms