RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 FAM90A20PA6NIJ5 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A9PA6NNJ1 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A12PA8MX19 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A5PA8MXJ8 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 J3QR06 171 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 CASQ2O14958 399 aaPredicted RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 OR2F2O95006 317 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 CDRT1O95170 752 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 IL1AP01583 271 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A15PP0C7V4 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A13PP0C7W8 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A14PP0C7W9 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A24PP0C7X0 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 LYL1P12980 280 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FSTP19883 344 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 CAPGP40121 348 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 RBM11P57052 281 aaKnown RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 RPS11P62280 158 aaKnown RBP eCLIP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 ST3GAL4Q11206 333 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 RIPK1Q13546 671 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 PIGYQ3MUY2 71 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 Q499Y3 187 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 OGFRL1Q5TC84 451 aaPredicted RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 DDI2Q5TDH0 399 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 C8orf59Q8N0T1 100 aaPredicted RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 SUMF2Q8NBJ7 301 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 OR13A1Q8NGR1 328 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 OR10K1Q8NGX5 313 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 TFAP2CQ92754 450 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 MRPS24Q96EL2 167 aaKnown RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 PGLYRP3Q96LB9 341 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 RBM14Q96PK6 669 aaKnown RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 DPCDQ9BVM2 203 aaPredicted RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM192AQ9GZU8 254 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 IDI2-AS1Q9NZ38 188 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 CKLFQ9UBR5 152 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 PSORS1C1Q9UIG5 152 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 ING4Q9UNL4 249 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 AMMECR1Q9Y4X0 333 aaPredicted RBP8.36□□□□□ -1.07
CPSF1-203ENST00000527916 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 TRBV5-7A0A0A0MS05 114 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 H0YHG0 523 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 M0QZK8 103 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 HSPB6O14558 160 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 FAM106CPP0CH98 169 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 GTF2F2P13984 249 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 NFYBP25208 207 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 GLP1RP43220 463 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 GP2P55259 537 aaKnown RBP8.35□□□□□ -1.07
CPSF1-203ENST00000527916 RCN1Q15293 331 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 NKAPLQ5M9Q1 402 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 LAIR2Q6ISS4 152 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 OR52M1Q8NGK5 317 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 PLPPR1Q8TBJ4 325 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 THRSPQ92748 146 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 ZNF184Q99676 751 aaPredicted RBP8.35□□□□□ -1.07
CPSF1-203ENST00000527916 SLC25A33Q9BSK2 321 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 ING3Q9NXR8 418 aa8.35□□□□□ -1.07
CPSF1-203ENST00000527916 LSM4Q9Y4Z0 139 aaKnown RBP8.35□□□□□ -1.07
CPSF1-203ENST00000527916 FAM172BPA6NC97 362 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 GEMIN2O14893 280 aaKnown RBP8.34□□□□□ -1.07
CPSF1-203ENST00000527916 ORC5O43913 435 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 OR7C1O76099 320 aaPredicted RBP8.34□□□□□ -1.07
CPSF1-203ENST00000527916 AMY1AP04745 511 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 AMY2AP04746 511 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 GNAO1P09471 354 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 CD24P25063 80 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 RAB7AP51149 207 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 MADCAM1Q13477 382 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 Q3ZCU0 254 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 UTF1Q5T230 341 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 RNLSQ5VYX0 342 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 LYPD6Q86Y78 171 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 OR8H3Q8N146 312 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 NANOGP1Q8N7R0 232 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 C8orf31Q8N9H6 132 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 OR13C5Q8NGS8 318 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 MRGPRDQ8TDS7 321 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 RPEQ96AT9 228 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 ASCL2Q99929 193 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 SPACA1Q9HBV2 294 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 FKBP14Q9NWM8 211 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
CPSF1-203ENST00000527916 TRAV8-7A0A075B6U6 113 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 TMEM30CPA0ZSE6 113 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 FAM90A10PA6NDY2 464 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 FAM90A7PA6NKC0 464 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 FAM90A23PA8MXZ1 464 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 MT-ND4P03905 459 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 GLAP06280 429 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 SERPINA2P20848 420 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 SLC6A1P30531 599 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 THBS3P49746 956 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 WNT4P56705 351 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 RBM39Q14498 530 aaKnown RBP8.33□□□□□ -1.08
CPSF1-203ENST00000527916 SLC22A6Q4U2R8 563 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 ZNF497Q6ZNH5 498 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 STX19Q8N4C7 294 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
CPSF1-203ENST00000527916 RFESDQ8TAC1 157 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms