RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 COL6A5A8TX70 2615 aa14.02□□□□□ -0.16
LMX1B-203ENST00000526117 TMEM272A0A1B0GTI8 110 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 MEX3AA1L020 520 aaKnown RBP14.02□□□□□ -0.17
LMX1B-203ENST00000526117 RNF212BA8MTL3 300 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 VGLL3A8MV65 326 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 HOXA3O43365 443 aaPredicted RBP14.02□□□□□ -0.17
LMX1B-203ENST00000526117 IGLV1-47P01700 117 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 COX7A1P24310 79 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 LGALS4P56470 323 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 CLDN12P56749 244 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 PRB3Q04118 309 aaPredicted RBP14.02□□□□□ -0.17
LMX1B-203ENST00000526117 Q3ZCU0 254 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 HES5Q5TA89 166 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 PRAMEF5Q5TYX0 476 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 BRICD5Q6PL45 260 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 OR56B1Q8NGI3 324 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 OR13F1Q8NGS4 319 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 ZNF596Q8TC21 504 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 MRGPRDQ8TDS7 321 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 MALSU1Q96EH3 234 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 MDFIQ99750 246 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 NICN1Q9BSH3 213 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 CENPOQ9BU64 300 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 DPAGT1Q9H3H5 408 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 KCNK15Q9H427 330 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 IDI2-AS1Q9NZ38 188 aa14.02□□□□□ -0.17
LMX1B-203ENST00000526117 C15orf65H3BRN8 121 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 F2RL2O00254 374 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 PAHP00439 452 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 ARG1P05089 322 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 SDC2P34741 201 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 GDNFP39905 211 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 SFXN4Q6P4A7 337 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 ABHD12Q8N2K0 398 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 OR5R1Q8NH85 324 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 DYRK2Q92630 601 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 CREB3L1Q96BA8 519 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 SULT4A1Q9BR01 284 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 C19orf24Q9BVV8 132 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 MRPS26Q9BYN8 205 aaKnown RBP14.01□□□□□ -0.17
LMX1B-203ENST00000526117 RIMS4Q9H426 269 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-203ENST00000526117 ING3Q9NXR8 418 aa14.01□□□□□ -0.17
LMX1B-203ENST00000526117 TRBV6-6A0A0A6YYG2 114 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 LOC100506127A0A0U1RQW1 187 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 AIREO43918 545 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 NAPSAO96009 420 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 BLVRBP30043 206 aaPredicted RBP14□□□□□ -0.17
LMX1B-203ENST00000526117 SSTR5P35346 364 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 DYNLT3P51808 116 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 C6orf201Q7Z4U5 140 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 CROCCP3Q8IVE0 287 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 C8orf31Q8N9H6 132 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 OR4P4Q8NGL7 312 aa14□□□□□ -0.17
LMX1B-203ENST00000526117 MRPL30Q8TCC3 161 aaKnown RBP14□□□□□ -0.17
LMX1B-203ENST00000526117 A0A1W2PRD5 423 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 A0A1W2PRF3 423 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 A0A1W2PRM7 423 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 SOCS1O15524 211 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 OMGP23515 440 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 COMPP49747 757 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-203ENST00000526117 TMEM50BP56557 158 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 SRSF2Q01130 221 aaKnown RBP13.99□□□□□ -0.17
LMX1B-203ENST00000526117 NKAPLQ5M9Q1 402 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 ZNF880Q6PDB4 577 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 C16orf87Q6PH81 154 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 MOB1BQ7L9L4 216 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 OR9G1Q8NH87 305 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 SPATA3Q8NHX4 192 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 ZNF286AQ9HBT8 521 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 PLEKHJ1Q9NW61 149 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 TRAPPC2LQ9UL33 140 aa13.99□□□□□ -0.17
LMX1B-203ENST00000526117 UBE2QL1A1L167 161 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 TMEM89A2RUT3 159 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 C12orf77C9JDV5 145 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 SPINT2O43291 252 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 SCGNO76038 276 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 IGHV4-59P01825 116 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 HTR1DP28221 377 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 VEGFCP49767 419 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 PRRX1P54821 245 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 LOXL3P58215 753 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 LRRC75BQ2VPJ9 315 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 HLA-DRB5Q30154 266 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 LDLRAD2Q5SZI1 272 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 LHFPL4Q7Z7J7 247 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.98□□□□□ -0.17
LMX1B-203ENST00000526117 C17orf50Q8WW18 174 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 ARL11Q969Q4 196 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 FAAP24Q9BTP7 215 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 FUNDC2Q9BWH2 189 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 RNF167Q9H6Y7 350 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 VPREB3Q9UKI3 123 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 MGAT4AQ9UM21 535 aa13.98□□□□□ -0.17
LMX1B-203ENST00000526117 METTL21EPA6NDL7 271 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 BTBD17A6NE02 478 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 OOSP1A8MZH6 123 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 RAB27BO00194 218 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 HKR1P10072 659 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 SLC2A2P11168 524 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms