RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DYNLRB1Q9NP97 96 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ISYNA1Q9NPH2 558 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ACOT13Q9NPJ3 140 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZNF275Q9NSD4 429 aaPredicted RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 ELF5Q9UKW6 265 aaPredicted RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 TP53TG3Q9ULZ0 132 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 HHLA2Q9UM44 414 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 LSM2Q9Y333 95 aaKnown RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 NOP16Q9Y3C1 178 aaKnown RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 RHBDD3Q9Y3P4 386 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MPC1Q9Y5U8 109 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 V9GYS6 101 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 PHF3Q92576 2039 aaKnown RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 CHD6Q8TD26 2715 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 FREM3P0C091 2139 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZFHX4Q86UP3 3567 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 DOPEY1Q5JWR5 2465 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 A0A087WXM4 84 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 IGHV1-69-2A0A0G2JMI3 117 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 TRBV5-5A0A0J9YX44 114 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ZNF816-ZNF321PA0A0X1KG74 233 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 LOC107986453A0A1B0GWG9 222 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 TRIM64CA6NLI5 447 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ZNF850A8MQ14 1090 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SNURFLB1AK76 121 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 F5H5P2 479 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 F8VVB4 439 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 F8VWA3 439 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 H0YL77 283 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 MLNRO43193 412 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 GMDSO60547 372 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 GPX5O75715 221 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 TNFAIP8O95379 198 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PTBP3O95758 552 aaKnown RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 LALBAP00709 142 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SERPINA3P01011 423 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 NRASP01111 189 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 HLA-DPB1P04440 258 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 HSMCR30P0CW71 290 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ATF1P18846 271 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 CELP19835 753 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 AZU1P20160 251 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PCMT1P22061 227 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PRKACBP22694 351 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 COL8A2P25067 703 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PMELP40967 661 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 CD200P41217 278 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 CRYBB2P43320 205 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 MAGEB1P43366 347 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SRP9P49458 86 aaKnown RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 TMEM33P57088 247 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 RPS11P62280 158 aaKnown RBP eCLIP2.56□□□□□ -2
VPS13B-209ENST00000521559 PRDX4Q13162 271 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OR8G1Q15617 311 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 CEACAM21Q3KPI0 293 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SPRNQ5BIV9 151 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 YIF1BQ5BJH7 314 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ARMCX4Q5H9R4 360 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 CLVS2Q5SYC1 327 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SYT6Q5T7P8 510 aaPredicted RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 UBE2UQ5VVX9 321 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 TMEM42Q69YG0 159 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 UNQ9370/PRO34162Q6UXP9 181 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 UTS2BQ765I0 119 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 BTN2A1Q7KYR7 527 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SERPINA12Q8IW75 414 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 Q8N377 158 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 FTMTQ8N4E7 242 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 MS4A15Q8N5U1 240 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ZFP41Q8N8Y5 198 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 Q8NBF4 154 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 BHLHE23Q8NDY6 225 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OR2Z1Q8NG97 314 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OR5A2Q8NGI9 324 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OR5D14Q8NGL3 314 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OR10AC1Q8NH08 325 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OR8S1Q8NH09 359 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 GPR148Q8TDV2 347 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ITLN1Q8WWA0 313 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OR5P3Q8WZ94 311 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PIGCQ92535 297 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 RGP1Q92546 391 aaPredicted RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 PHYHIPQ92561 330 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 FCGR1BQ92637 280 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 RDH5Q92781 318 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 UFD1Q92890 307 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 FGGYQ96C11 551 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SMIM19Q96E16 107 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ADAT3Q96EY9 351 aaPredicted RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 RNF170Q96K19 258 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PGLYRP3Q96LB9 341 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 OPALINQ96PE5 141 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 FOXC2Q99958 501 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 MICU1Q9BPX6 476 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PDCD1LG2Q9BQ51 273 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SOSTQ9BQB4 213 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PAPOLGQ9BWT3 736 aaKnown RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 FGF23Q9GZV9 251 aaPredicted RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 TPK1Q9H3S4 243 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SRD5A3Q9H8P0 318 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms