RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TMEM213A2RRL7 107 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 PRAMEF26H0Y7S4 382 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 J3QRK9 145 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 TP53I11O14683 189 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 UBDO15205 165 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SOCS1O15524 211 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 RLN2P04090 185 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 GYPCP04921 128 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CT45A6P0DMU7 189 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CT45A5P0DMU8 189 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CT45A7P0DMV0 189 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 HIST1H1BP16401 226 aaKnown RBP2.75□□□□□ -1.97
SKP1-208ENST00000521216 IL1RNP18510 177 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CELP19835 753 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 HLA-DMAP28067 261 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CASP1P29466 404 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 GNRHRP30968 328 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 IDH2P48735 452 aaKnown RBP2.75□□□□□ -1.97
SKP1-208ENST00000521216 RAB5CP51148 216 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 RAB7AP51149 207 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 XKP51811 444 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 AQP4P55087 323 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 TMEM33P57088 247 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SYNJ2BPP57105 145 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 KLF3P57682 345 aaPredicted RBP2.75□□□□□ -1.97
SKP1-208ENST00000521216 RAB11AP62491 216 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SLAMF1Q13291 335 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SLC9A3R2Q15599 337 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 TRAM1Q15629 374 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 RAB11BQ15907 218 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CT45A1Q5HYN5 189 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 PRR9Q5T870 116 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 LPCAT4Q643R3 524 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 ADNP2Q6IQ32 1131 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SPESP1Q6UW49 350 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 MBOAT2Q6ZWT7 520 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 TCF24Q7RTU0 167 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 GRINAQ7Z429 371 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 LRRC28Q86X40 367 aaPredicted RBP2.75□□□□□ -1.97
SKP1-208ENST00000521216 LRRC52Q8N7C0 313 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CT45A3Q8NHU0 189 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 PHF10Q8WUB8 498 aaKnown RBP2.75□□□□□ -1.97
SKP1-208ENST00000521216 RTN4IP1Q8WWV3 396 aaPredicted RBP2.75□□□□□ -1.97
SKP1-208ENST00000521216 CDS1Q92903 461 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 DCUN1D1Q96GG9 259 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 Q96MT0 163 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 COL21A1Q96P44 957 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 OR2V2Q96R30 315 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 PANX1Q96RD7 426 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 PHB2Q99623 299 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 TMEM208Q9BTX3 173 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 ANKRD60Q9BZ19 345 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 DCSTAMPQ9H295 470 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SLC38A1Q9H2H9 487 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 C1orf198Q9H425 327 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 RNF122Q9H9V4 155 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 TPT1P8Q9HAU6 139 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 CACYBPQ9HB71 228 aaKnown RBP2.75□□□□□ -1.97
SKP1-208ENST00000521216 C1orf109Q9NX04 203 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 GCNT4Q9P109 453 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SLC17A7Q9P2U7 560 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 RWDD2AQ9UIY3 292 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 FBXO5Q9UKT4 447 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 POFUT2Q9Y2G5 429 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 BCORL1Q5H9F3 1711 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 MYO5CQ9NQX4 1742 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 SCN4AP35499 1836 aa2.75□□□□□ -1.97
SKP1-208ENST00000521216 PALLDQ8WX93 1383 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 ABCA8O94911 1581 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 MYH4Q9Y623 1939 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 RPRD2Q5VT52 1461 aaKnown RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 TRBV9A0A0B4J1U6 114 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 A0A1W2PQL4 384 aaPredicted RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 NCBP2LA6PVI3 153 aaKnown RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 KLRC4-KLRK1H3BQV0 150 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 H7C1H1 209 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 MRASO14807 208 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 KDELR3O43731 214 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 CHST1O43916 411 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 KCNK2O95069 426 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 CDRT1O95170 752 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 FADS2O95864 444 aaKnown RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 RPN2P04844 631 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 GABRA1P14867 456 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 ZNF25P17030 456 aaPredicted RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 CSNK2A2P19784 350 aaPredicted RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 TUBG1P23258 451 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 STOMP27105 288 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 ELK4P28324 431 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 GGT2P36268 569 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 MAGEA12P43365 314 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 MRPL19P49406 292 aaKnown RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 RAB9AP51151 201 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 DNAJB13P59910 316 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 RPL23P62829 140 aaKnown RBP2.74□□□□□ -1.97
SKP1-208ENST00000521216 GNA12Q03113 381 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 KIR2DS1Q14954 304 aa2.74□□□□□ -1.97
SKP1-208ENST00000521216 RBMY1FQ15415 496 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms