RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 J3QLW9 94 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 PHYHO14832 338 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 RAB29O14966 203 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 SPINT2O43291 252 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 RPP14O95059 124 aaKnown RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 ATP6V1G2O95670 118 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 FADS2O95864 444 aaKnown RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 IGHV3-13P01766 116 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 IGF1P05019 195 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 TACSTD2P09758 323 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 HSMCR30P0CW71 290 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 LYNX1P0DP58 116 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 DAOP14920 347 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 ZNF19P17023 458 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 CHATP28329 748 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 BDKRB2P30411 391 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 OPRL1P41146 370 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 GNG10P50151 68 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 PPOXP50336 477 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 RIDAP52758 137 aaKnown RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 RAG2P55895 527 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 ZNF121P58317 390 aaPredicted RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 TNFAIP6P98066 277 aaPredicted RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 ZNF92Q03936 586 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 PSG7Q13046 419 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 GAGE2BQ13066 116 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 GGTLC2Q14390 218 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 TNXAQ16473 311 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 ODF4Q2M2E3 257 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 SNAI3Q3KNW1 292 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 KRTAP27-1Q3LI81 207 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 GAGE2EQ4V326 116 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 SOHLH1Q5JUK2 328 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 GLYATL3Q5SZD4 288 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 C6orf52Q5T4I8 152 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 THOC7Q6I9Y2 204 aaKnown RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 GAGE2AQ6NT46 116 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 PLEKHG7Q6ZR37 379 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 PGAP1Q75T13 922 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 FAM220AQ7Z4H9 259 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 LHFPL3Q86UP9 236 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 C8orf59Q8N0T1 100 aaPredicted RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 ZNF525Q8N782 197 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 KLHDC1Q8N7A1 406 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 LRTM2Q8N967 370 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 WFDC11Q8NEX6 87 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 OR52H1Q8NGJ2 320 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 OR2T27Q8NH04 317 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 OR2AE1Q8NHA4 323 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 CNIH3Q8TBE1 160 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 ENKURQ8TC29 256 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 GTF3AQ92664 365 aaKnown RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 TIMD4Q96H15 378 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 REEP6Q96HR9 211 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 LPAR2Q9HBW0 351 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 TMEM100Q9NV29 134 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 GAGE2DQ9UEU5 116 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 PURGQ9UJV8 347 aaKnown RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 GNG8Q9UK08 70 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 COPS3Q9UNS2 423 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 RPL36Q9Y3U8 105 aaKnown RBP2.3□□□□□ -2.04
SKP1-204ENST00000517691 OTOGQ6ZRI0 2925 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 FREM1Q5H8C1 2179 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 ALPK2Q86TB3 2170 aa2.3□□□□□ -2.04
SKP1-204ENST00000517691 AKAP9Q99996 3911 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SPG11Q96JI7 2443 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IGLV3-9A0A075B6K5 115 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IGHV1-69-2A0A0G2JMI3 117 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 A0A1W2PP11 408 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 C5orf63A6NC05 138 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FAM74A7A6NL05 159 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 H3BSA7 217 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 H3BSH0 61 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 M0QXV9 152 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PPIHO43447 177 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 XRCC2O43543 280 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SC5DO75845 299 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IGHV1-46P01743 117 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 HLA-DPB1P04440 258 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 GNAO1P09471 354 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CD99P14209 185 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PAX1P15863 534 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PMCHP20382 165 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 KITLGP21583 273 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CA6P23280 308 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CFL1P23528 166 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 COL8A2P25067 703 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MNDAP41218 407 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 P2RY1P47900 373 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 GLIPR1P48060 266 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 NPBWR2P48146 333 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PDLIM4P50479 330 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 AQP4P55087 323 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 DSCR9P59020 149 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 UBE2MP61081 183 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 RAB14P61106 215 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ADARB1P78563 741 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 DGCR2P98153 550 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ZNF91Q05481 1191 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms