RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR52M1Q8NGK5 317 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 OR13C5Q8NGS8 318 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 OR10K1Q8NGX5 313 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 TNFAIP8L1Q8WVP5 186 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 CYGBQ8WWM9 190 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 ORAI1Q96D31 301 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 NR1H4Q96RI1 486 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-216ENST00000512683 IFT22Q9H7X7 185 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 CHCHD3Q9NX63 227 aaKnown RBP9.93□□□□□ -0.82
VEGFA-216ENST00000512683 BABAM2Q9NXR7 383 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF581Q9P0T4 197 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 PSG11Q9UQ72 335 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 TRBV5-5A0A0J9YX44 114 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 A0A1W2PPI3 338 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 IRGMA1A4Y4 181 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 NUDT19A8MXV4 375 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 AP4M1O00189 453 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 HSPB6O14558 160 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 CDRT1O95170 752 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 CD2P06729 351 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 GNAO1P09471 354 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 CDX1P47902 265 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-216ENST00000512683 RPS11P62280 158 aaKnown RBP eCLIP9.92□□□□□ -0.82
VEGFA-216ENST00000512683 HES1Q14469 280 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 KIR2DS1Q14954 304 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 RCN1Q15293 331 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 PIGYQ3MUY2 71 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 PAN3Q58A45 887 aaKnown RBP9.92□□□□□ -0.82
VEGFA-216ENST00000512683 DMKNQ6E0U4 476 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-216ENST00000512683 C11orf87Q6NUJ2 197 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 STPG2Q8N412 459 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 DHRSXQ8N5I4 330 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 LINC00311Q8N616 119 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 RNF152Q8N8N0 203 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 OR13A1Q8NGR1 328 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 OR10X1Q8NGY0 326 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 OR52N1Q8NH53 320 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 OR56B4Q8NH76 319 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 PLPPR1Q8TBJ4 325 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 GGHQ92820 318 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 GHSRQ92847 366 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 SMIM19Q96E16 107 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 TMEM80Q96HE8 168 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 GPER1Q99527 375 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 CHCHD6Q9BRQ6 235 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 TMEM138Q9NPI0 162 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 C8orf4Q9NR00 106 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 LIN7CQ9NUP9 197 aaKnown RBP9.92□□□□□ -0.82
VEGFA-216ENST00000512683 KIF25Q9UIL4 384 aa9.92□□□□□ -0.82
VEGFA-216ENST00000512683 EXOSC1Q9Y3B2 195 aaKnown RBP9.92□□□□□ -0.82
VEGFA-216ENST00000512683 SH2D7A6NKC9 451 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-216ENST00000512683 CCL24O00175 119 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 GPX5O75715 221 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 HTR3BO95264 441 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 ELANEP08246 267 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 IGFBP3P17936 291 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-216ENST00000512683 MYL12AP19105 171 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 CD1BP29016 333 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 GLP1RP43220 463 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 GABPB1Q06547 395 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-216ENST00000512683 ST3GAL4Q11206 333 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 FOXE3Q13461 319 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 DOC2BQ14184 412 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 RSU1Q15404 277 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 NHLRC3Q5JS37 347 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 RSBN1Q5VWQ0 802 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-216ENST00000512683 SETD9Q8NE22 299 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 OR2T10Q8NGZ9 312 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 OR8U1Q8NH10 309 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 PGLYRP3Q96LB9 341 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 FAM192AQ9GZU8 254 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 ABCG5Q9H222 651 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 RAB9BQ9NP90 201 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 PAK1IP1Q9NWT1 392 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-216ENST00000512683 IL36GQ9NZH8 169 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
VEGFA-216ENST00000512683 TRAV8-7A0A075B6U6 113 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 MAGEA13PA6NCF6 341 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 ORC5O43913 435 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF780AO75290 641 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-216ENST00000512683 IGKV1D-33P01593 117 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 IGKV1-33P01594 117 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 IL3RAP26951 378 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 BDKRB2P30411 391 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF93P35789 620 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-216ENST00000512683 RBM11P57052 281 aaKnown RBP9.9□□□□□ -0.82
VEGFA-216ENST00000512683 TMEM30BQ3MIR4 351 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 C9orf66Q5T8R8 295 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 DDI2Q5TDH0 399 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 STEAP3Q658P3 488 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 LINC00596Q86U02 117 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 IZUMO1Q8IYV9 350 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 ZFP41Q8N8Y5 198 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 KLHL30-AS1Q8NEE0 82 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 OR5M8Q8NGP6 311 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 FBLIM1Q8WUP2 373 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 NOL4LQ96MY1 436 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-216ENST00000512683 ING4Q9UNL4 249 aa9.9□□□□□ -0.82
VEGFA-216ENST00000512683 ST3GAL6Q9Y274 331 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms