RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
CLDND1-221ENST00000510541 BANF2Q9H503 90 aa14.01□□□□□ -0.17
CLDND1-221ENST00000510541 VPREB3Q9UKI3 123 aa14.01□□□□□ -0.17
CLDND1-221ENST00000510541 RAB22AQ9UL26 194 aa14.01□□□□□ -0.17
CLDND1-221ENST00000510541 PEX16Q9Y5Y5 336 aa14.01□□□□□ -0.17
CLDND1-221ENST00000510541 SHISA3A0PJX4 238 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 NOTOA8MTQ0 251 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 MPIG6BO95866 241 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 PRRX1P54821 245 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 ATAD3CQ5T2N8 411 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 C6orf183Q5T699 404 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 ABHD12Q8N2K0 398 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 LINC00311Q8N616 119 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14□□□□□ -0.17
CLDND1-221ENST00000510541 OR9G1Q8NH87 305 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 KCTD7Q96MP8 289 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 NEDD4LQ96PU5 975 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 RAB18Q9NP72 206 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 IDI2-AS1Q9NZ38 188 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 MGAT4AQ9UM21 535 aa14□□□□□ -0.17
CLDND1-221ENST00000510541 SOX21Q9Y651 276 aaPredicted RBP14□□□□□ -0.17
CLDND1-221ENST00000510541 MDFIC2A0A1B0GVS7 189 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 BTBD17A6NE02 478 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 MMP23AO75900 390 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 ARG1P05089 322 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 HTR1DP28221 377 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 LRRC75BQ2VPJ9 315 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 C2orf76Q3KRA6 126 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 C22orf42Q6IC83 251 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 ZNF782Q6ZMW2 699 aaPredicted RBP13.99□□□□□ -0.17
CLDND1-221ENST00000510541 OR4P4Q8NGL7 312 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 ETAA1Q9NY74 926 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 ZNF581Q9P0T4 197 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 DPM3Q9P2X0 92 aa13.99□□□□□ -0.17
CLDND1-221ENST00000510541 LY6LH3BQJ8 138 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 NAPSAO96009 420 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 CD36P16671 472 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 CEACAM3P40198 252 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 GLP1RP43220 463 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 DLX1P56177 255 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 ARL6IP1Q15041 203 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 P2RY14Q15391 338 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 HLA-DRB5Q30154 266 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 ZNF880Q6PDB4 577 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 MOB1BQ7L9L4 216 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 PDZD9Q8IXQ8 264 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 OR51D1Q8NGF3 324 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 OR56B1Q8NGI3 324 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 CHIAQ9BZP6 476 aa13.98□□□□□ -0.17
CLDND1-221ENST00000510541 LEUTXA8MZ59 168 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 HSPB6O14558 160 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 SCGNO76038 276 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 DIRAS3O95661 229 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 LOXL3P58215 753 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 HTD2P86397 168 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 LDLRAD2Q5SZI1 272 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 CCDC144NLQ6NUI1 221 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 NR2C2APQ86WQ0 139 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 CROCCP3Q8IVE0 287 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 PIFOQ8TCI5 191 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 FAM46BQ96A09 425 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 YIPF6Q96EC8 236 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 CENPOQ9BU64 300 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 MMP28Q9H239 520 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLDND1-221ENST00000510541 PITPNC1Q9UKF7 332 aa13.97□□□□□ -0.17
CLDND1-221ENST00000510541 AMMECR1Q9Y4X0 333 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-221ENST00000510541 BUB1B-PAK6H3BSN5 160 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 SPINT2O43291 252 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 TSPAN9O75954 239 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 IGHV4-59P01825 116 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 COX7A1P24310 79 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 BLVRBP30043 206 aaPredicted RBP13.96□□□□□ -0.17
CLDND1-221ENST00000510541 ARHGDIBP52566 201 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 ZNF137PP52743 207 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 TMEM50BP56557 158 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 NEDD8Q15843 81 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 SRSF7Q16629 238 aaKnown RBP eCLIP13.96□□□□□ -0.17
CLDND1-221ENST00000510541 PRAMEF5Q5TYX0 476 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 OR10K2Q6IF99 312 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 MRGPRDQ8TDS7 321 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 NEK7Q8TDX7 302 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 GCDHQ92947 438 aaPredicted RBP13.96□□□□□ -0.17
CLDND1-221ENST00000510541 SSX3Q99909 188 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 C16orf95Q9H693 158 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 RANBP3Q9H6Z4 567 aaPredicted RBP13.96□□□□□ -0.17
CLDND1-221ENST00000510541 PLEKHJ1Q9NW61 149 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 TRAPPC2LQ9UL33 140 aa13.96□□□□□ -0.17
CLDND1-221ENST00000510541 A0A0A6YYD4 124 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 TMEM272A0A1B0GTI8 110 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 METTL21EPA6NDL7 271 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 J3QR06 171 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 GPR137BO60478 399 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 GDNFP39905 211 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 ACTG1P63261 375 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 C16orf82Q7Z2V1 217 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 MRPL30Q8TCC3 161 aaKnown RBP13.95□□□□□ -0.18
CLDND1-221ENST00000510541 ARL11Q969Q4 196 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 SULT4A1Q9BR01 284 aa13.95□□□□□ -0.18
CLDND1-221ENST00000510541 OR51E2Q9H255 320 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms