RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SACSQ9NZJ4 4579 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 NCBP2LA6PVI3 153 aaKnown RBP12.41□□□□□ -0.42
RAB40C-202ENST00000509637 H3BNX3 289 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 CCRL2O00421 344 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 HTR3BO95264 441 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 OCM2P0CE71 109 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
RAB40C-202ENST00000509637 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
RAB40C-202ENST00000509637 SLC6A1P30531 599 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 ECI1P42126 302 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 CDX1P47902 265 aaPredicted RBP12.41□□□□□ -0.42
RAB40C-202ENST00000509637 SOX2P48431 317 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 GPR50Q13585 617 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 FHL3Q13643 280 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 TEX38Q6PEX7 206 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 UNQ9370/PRO34162Q6UXP9 181 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 SLC16A12Q6ZSM3 486 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 SATL1Q86VE3 508 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 LINC00311Q8N616 119 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 COMMD1Q8N668 190 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 ZNF439Q8NDP4 499 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 OR10A7Q8NGE5 316 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 OR5D14Q8NGL3 314 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 CCDC107Q8WV48 283 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 S1PR3Q99500 378 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 FAM53CQ9NYF3 392 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 ENOPH1Q9UHY7 261 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 SORL1Q92673 2214 aa12.41□□□□□ -0.42
RAB40C-202ENST00000509637 AP4M1O00189 453 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 EI24O14681 340 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 GEMIN2O14893 280 aaKnown RBP12.4□□□□□ -0.42
RAB40C-202ENST00000509637 RAMP3O60896 148 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 GAPDHP04406 335 aaKnown RBP12.4□□□□□ -0.42
RAB40C-202ENST00000509637 SLC35B1P78383 322 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 FOXE3Q13461 319 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 FOXRED2Q8IWF2 684 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 SYS1Q8N2H4 156 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 OR10X1Q8NGY0 326 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 RTN4IP1Q8WWV3 396 aaPredicted RBP12.4□□□□□ -0.42
RAB40C-202ENST00000509637 GNB4Q9HAV0 340 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 LIN7CQ9NUP9 197 aaKnown RBP12.4□□□□□ -0.42
RAB40C-202ENST00000509637 GFOD1Q9NXC2 390 aa12.4□□□□□ -0.42
RAB40C-202ENST00000509637 MAGEA13PA6NCF6 341 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 SEC14L6B5MCN3 397 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 IGHG4P01861 327 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 MT-ND4P03905 459 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 PSMB8P28062 276 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 CT45A1Q5HYN5 189 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 C1orf146Q5VVC0 180 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 OR5AK2Q8NH90 309 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 CT45A3Q8NHU0 189 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 PYDC1Q8WXC3 89 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 ARL11Q969Q4 196 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 JAM3Q9BX67 310 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 IFT22Q9H7X7 185 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 IMPAD1Q9NX62 359 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 DHDHQ9UQ10 334 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 ST3GAL6Q9Y274 331 aa12.39□□□□□ -0.43
RAB40C-202ENST00000509637 DNAH7Q8WXX0 4024 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 TMEM212A6NML5 194 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 ELANEP08246 267 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 LIMS3P0CW19 117 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 LIMS4P0CW20 117 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 FCGR1AP12314 374 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 RAB3AP20336 220 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 CNTFRP26992 372 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 CD1BP29016 333 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 PPIFP30405 207 aaKnown RBP12.38□□□□□ -0.43
RAB40C-202ENST00000509637 RBM11P57052 281 aaKnown RBP12.38□□□□□ -0.43
RAB40C-202ENST00000509637 CXorf66Q5JRM2 361 aaPredicted RBP12.38□□□□□ -0.43
RAB40C-202ENST00000509637 NHLRC3Q5JS37 347 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 C9orf66Q5T8R8 295 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 MEDAGQ5VYS4 303 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 SBSPONQ8IVN8 264 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 OR52M1Q8NGK5 317 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 OR13C5Q8NGS8 318 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 OR2T10Q8NGZ9 312 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 RHOXF1Q8NHV9 184 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 SLC29A1Q99808 456 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 ING4Q9UNL4 249 aa12.38□□□□□ -0.43
RAB40C-202ENST00000509637 C12orf77C9JDV5 145 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 G3V318 75 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 I3L521 148 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 SDCBPO00560 298 aaPredicted RBP12.37□□□□□ -0.43
RAB40C-202ENST00000509637 MPZL2O60487 215 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 LALBAP00709 142 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 SNRPBP14678 240 aaKnown RBP12.37□□□□□ -0.43
RAB40C-202ENST00000509637 GZMHP20718 246 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 KCNJ3P48549 501 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 GNB1P62873 340 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 RSU1Q15404 277 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 ZNF260Q3ZCT1 412 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 ZNF497Q6ZNH5 498 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 OR5M8Q8NGP6 311 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms