RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 F5H5T6 163 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 RNASEK-C17orf49H0YIS7 233 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 PSMD11O00231 422 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 FGF16O43320 207 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 IGKV1-16P04430 117 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 IFI30P13284 250 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 HSPA13P48723 471 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 AQP5P55064 265 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 RAB2AP61019 212 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 TSPAN31Q12999 210 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 FAM162BQ5T6X4 162 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 Q6ZRU5 148 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 ST13P4Q8IZP2 240 aaPredicted RBP1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 OR2Y1Q8NGV0 311 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 POTEKPQ9BYX7 375 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 ZNF638Q14966 1978 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 IGKV1-12A0A0C4DH73 117 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 C8orf87E5RJ46 101 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 PLPP3O14495 311 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 SLC25A20O43772 301 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 IGKV1D-12P01611 117 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 CD99P14209 185 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 INPP1P49441 399 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 MP68P56378 58 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 SPIN4Q56A73 249 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 AHSA2Q719I0 299 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 OR10P1Q8NGE3 313 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 IFT81Q8WYA0 676 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 MSANTD3Q96H12 275 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 FAAP24Q9BTP7 215 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 BCL2L14Q9BZR8 327 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 ZNF286AQ9HBT8 521 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 MAT2BQ9NZL9 334 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 SORL1Q92673 2214 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 TRPM6Q9BX84 2022 aa1.49□□□□□ -2.17
TOPBP1-204ENST00000505804 IGHV3OR15-7A0A075B7D8 119 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 GOLGA8IPA6NC78 632 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 POLR3GO15318 223 aaPredicted RBP1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 CST4P01036 141 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 GABRA3P34903 492 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 OR8G1Q15617 311 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 BSXQ3C1V8 233 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 KRTAP13-4Q3LI77 160 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 PCOTHQ58A44 107 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 HES3Q5TGS1 186 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 DNAAF3Q8N9W5 541 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 TMEM239Q8WW34 195 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 PRSS27Q9BQR3 290 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 SIKE1Q9BRV8 207 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 AICDAQ9GZX7 198 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 GOLPH3Q9H4A6 298 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 CCL26Q9Y258 94 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 OR51B4Q9Y5P0 310 aa1.48□□□□□ -2.17
TOPBP1-204ENST00000505804 ABCB11O95342 1321 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 HMCN1Q96RW7 5635 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 IGSF23A1L1A6 192 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 A8MWP6 167 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 LTAP01374 205 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 CCL2P13500 99 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 LCN1P31025 176 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 DYNLL1P63167 89 aaKnown RBP1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 TRIML2Q8N7C3 387 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 FAM45AQ8TCE6 357 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 CD200R1Q8TD46 325 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 GPR119Q8TDV5 335 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 HAUS4Q9H6D7 363 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 METTL8Q9H825 291 aaKnown RBP1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 SNX24Q9Y343 169 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 CRB1P82279 1406 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 RAB3GAP2Q9H2M9 1393 aa1.47□□□□□ -2.17
TOPBP1-204ENST00000505804 LOC102725191A0A1B0GVB3 256 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 F8VP50 259 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 J3QLI3 93 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 TOR1AO14656 332 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 FABP7O15540 132 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 CRXO43186 299 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 LDOC1O95751 146 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 CRYGDP07320 174 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 AKR1C4P17516 323 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 BLVRBP30043 206 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 DEFA6Q01524 100 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 TMEM176BQ3YBM2 270 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 ACSBG2Q5FVE4 666 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 LRRC6Q86X45 466 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 ACBD4Q8NC06 268 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 OR4C16Q8NGL9 310 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 OR9I1Q8NGQ6 314 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 RNASE11Q8TAA1 199 aaKnown RBP1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 DTD1Q8TEA8 209 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 DDIT4LQ96D03 193 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 MRAP2Q96G30 205 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 CAPZA3Q96KX2 299 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 MRM2Q9UI43 246 aaKnown RBP1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 STK38LQ9Y2H1 464 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 ICE1Q9Y2F5 2266 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 COL4A2P08572 1712 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 GBF1Q92538 1859 aa1.46□□□□□ -2.18
TOPBP1-204ENST00000505804 ODF3BA8MYP8 253 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 K7EQS6 105 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 ZNF189O75820 626 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms