RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 IFT22Q9H7X7 185 aa9.58□□□□□ -0.88
PDLIM7-214ENST00000505746 IL36GQ9NZH8 169 aa9.58□□□□□ -0.88
PDLIM7-214ENST00000505746 ZNF281Q9Y2X9 895 aa9.58□□□□□ -0.88
PDLIM7-214ENST00000505746 A0A1W2PPI3 338 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 TMEM30CPA0ZSE6 113 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 FGF16O43320 207 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 OR7C1O76099 320 aaPredicted RBP9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 CDRT1O95170 752 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 BDKRB2P30411 391 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 SSTR5P35346 364 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 GNG10P50151 68 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 ETV1P50549 477 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 RBM11P57052 281 aaKnown RBP9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 DDI2Q5TDH0 399 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 C5orf56Q8N8D9 126 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 OR51D1Q8NGF3 324 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 OR52N1Q8NH53 320 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 CHPT1Q8WUD6 406 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 GPR61Q9BZJ8 451 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 BABAM2Q9NXR7 383 aa9.57□□□□□ -0.88
PDLIM7-214ENST00000505746 SERPINE3A8MV23 424 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 OGG1O15527 345 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 WBP4O75554 376 aaKnown RBP9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 MPIG6BO95866 241 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 IGKV1D-33P01593 117 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 IGKV1-33P01594 117 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 GAPDHP04406 335 aaKnown RBP9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 MYL12AP19105 171 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 SLC6A1P30531 599 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 SLC35B1P78383 322 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 DIAPH2-AS1Q14236 149 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 GPR176Q14439 515 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 HNF4GQ14541 408 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 MPV17LQ2QL34 196 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 OR2G6Q5TZ20 316 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 XAF1Q6GPH4 301 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 ZNF329Q86UD4 541 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 FOXRED2Q8IWF2 684 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 OR52M1Q8NGK5 317 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 ARL11Q969Q4 196 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 SMIM19Q96E16 107 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 ZFP57Q9NU63 452 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 CHCHD3Q9NX63 227 aaKnown RBP9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 CKLFQ9UBR5 152 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 PLXNB1O43157 2135 aa9.56□□□□□ -0.88
PDLIM7-214ENST00000505746 TRAV39A0A0B4J263 110 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 CCRL2O00421 344 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 SDCBPO00560 298 aaPredicted RBP9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 HSD17B6O14756 317 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 GEMIN2O14893 280 aaKnown RBP9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 ORC5O43913 435 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 GTF2F2P13984 249 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 SERPINA2P20848 420 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 EBI3Q14213 229 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 ATAD3CQ5T2N8 411 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 TTC23Q5W5X9 447 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 SLC35E3Q7Z769 313 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 MOB3BQ86TA1 216 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 STX19Q8N4C7 294 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 COMMD1Q8N668 190 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 LINC00482Q8N8I6 264 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 C8orf31Q8N9H6 132 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 NEK7Q8TDX7 302 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 DPF1Q92782 380 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 GHSRQ92847 366 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 SPACA1Q9HBV2 294 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 RAB9BQ9NP90 201 aa9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 DIMT1Q9UNQ2 313 aaKnown RBP9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 EXOSC1Q9Y3B2 195 aaKnown RBP9.55□□□□□ -0.88
PDLIM7-214ENST00000505746 DSCAML1Q8TD84 2053 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 IGHV1-3A0A0C4DH29 117 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 A0A1W2PPE3 182 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 NCBP2LA6PVI3 153 aaKnown RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 C15orf65H3BRN8 121 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 GPX5O75715 221 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 TNFAIP8O95379 198 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 IGHG2P01859 326 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 MT-ND4P03905 459 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 IGFBP3P17936 291 aaPredicted RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 IL3RAP26951 378 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 RPL23AP62750 156 aaKnown RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 Q499Y3 187 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 SLC22A6Q4U2R8 563 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 YIF1BQ5BJH7 314 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 DEFB121Q5J5C9 76 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 MRPL41Q8IXM3 137 aaKnown RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 C8orf59Q8N0T1 100 aaPredicted RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 LINC00311Q8N616 119 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 OR2T10Q8NGZ9 312 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 CCDC107Q8WV48 283 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 MRPS24Q96EL2 167 aaKnown RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 TMEM80Q96HE8 168 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 NOL4LQ96MY1 436 aaPredicted RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 MCRIP2Q9BUT9 160 aaKnown RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 GON7Q9BXV9 100 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 ZNF581Q9P0T4 197 aa9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 SIRT4Q9Y6E7 314 aaPredicted RBP9.54□□□□□ -0.88
PDLIM7-214ENST00000505746 TRBV5-5A0A0J9YX44 114 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms