RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ADAM30Q9UKF2 790 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 PCDHB10Q9UN67 800 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 CENPVL3A0A0U1RRI6 287 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 KBTBD11-OT1A0A1B0GTJ5 212 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 UBE2QL1A1L167 161 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 TMEM235A6NFC5 223 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 NKX6-3A6NJ46 265 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 SERPINE3A8MV23 424 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 ODF3BA8MYP8 253 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 M0R1W7 72 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 PROP1O75360 226 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 TPPPO94811 219 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 TGFAP01135 160 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 RBP4P02753 201 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 HEXAP06865 529 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 LIPFP07098 398 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 FCGR3AP08637 254 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 GSTP1P09211 210 aaKnown RBP4.03□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF728P0DKX0 622 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 NDUFB7P17568 137 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 NAT1P18440 290 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 GATA3P23771 443 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 PRTN3P24158 256 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 CD34P28906 385 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 TNFSF8P32971 234 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF134P52741 427 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 TAS2R20P59543 309 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 SCN1BQ07699 218 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 SRSF7Q16629 238 aaKnown RBP eCLIP4.03□□□□□ -1.76
LMNB1-208ENST00000504788 CDNFQ49AH0 187 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 KRBOX4Q5JUW0 171 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 ATAD3CQ5T2N8 411 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 HACD4Q5VWC8 232 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 CD276Q5ZPR3 534 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 CYB5R2Q6BCY4 276 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 FIP1L1Q6UN15 594 aaKnown RBP4.03□□□□□ -1.76
LMNB1-208ENST00000504788 HEPN1Q6WQI6 88 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF554Q86TJ5 538 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 MFSD4AQ8N468 514 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 OR6Q1Q8NGQ2 317 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 OR4K15Q8NH41 348 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 GPX8Q8TED1 209 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 RAB3CQ96E17 227 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 AGMATQ9BSE5 352 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 ATG5Q9H1Y0 275 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 MMP27Q9H306 513 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 Q9N2K0 584 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 TAS2R3Q9NYW6 316 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 UBE2J1Q9Y385 318 aaPredicted RBP4.03□□□□□ -1.76
LMNB1-208ENST00000504788 RBMX2Q9Y388 322 aaKnown RBP4.03□□□□□ -1.76
LMNB1-208ENST00000504788 SOX21Q9Y651 276 aaPredicted RBP4.03□□□□□ -1.76
LMNB1-208ENST00000504788 KPTNQ9Y664 436 aa4.03□□□□□ -1.76
LMNB1-208ENST00000504788 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
LMNB1-208ENST00000504788 A0A0G2JMP0 313 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 A0A0X1KG70 313 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 METTL21EPA6NDL7 271 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ZNF729A6NN14 1252 aaPredicted RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 MCRIP1C9JLW8 97 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 LY6LH3BQJ8 138 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ENSAO43768 121 aaKnown RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ORC5O43913 435 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 IGHV1-8P0DP01 117 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 IGHV4-38-2P0DP08 117 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 HOXB4P17483 251 aaPredicted RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 OMGP23515 440 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 EDDM3BP56851 147 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ARF6P62330 175 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 PRB3Q04118 309 aaPredicted RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 RBM39Q14498 530 aaKnown RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 EDDM3AQ14507 147 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 NKAPLQ5M9Q1 402 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ZNF660Q6AZW8 331 aaPredicted RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 CNIH2Q6PI25 160 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 LINC00299Q6ZSB3 139 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 C9orf139Q6ZV77 190 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 GDPD3Q7L5L3 318 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 LYSMD2Q8IV50 215 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ODF3L1Q8IXM7 274 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 IZUMO1Q8IYV9 350 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 GVQW1Q8N7I0 195 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 DTX3Q8N9I9 347 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 OR4M2Q8NGB6 313 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 OR11H6Q8NGC7 330 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 MCFD2Q8NI22 146 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 MRGPRDQ8TDS7 321 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 NUDCD2Q8WVJ2 157 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 TRIM63Q969Q1 353 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ST6GALNAC6Q969X2 333 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ZNF714Q96N38 554 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 KRTAP9-2Q9BYQ4 174 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 PARP12Q9H0J9 701 aaKnown RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 PRDM13Q9H4Q3 707 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 AKIP1Q9NQ31 210 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 C12orf4Q9NQ89 552 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 PLEKHJ1Q9NW61 149 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ETAA1Q9NY74 926 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 ZNF230Q9UIE0 474 aaPredicted RBP4.02□□□□□ -1.77
LMNB1-208ENST00000504788 TRAV18A0A075B6X5 111 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 MEIKINA0A087WXM9 373 aa4.02□□□□□ -1.77
LMNB1-208ENST00000504788 hADV38S2A0JD32 116 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms