RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GABRA2P47869 451 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 P2RX3P56373 397 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 BTG1P62324 171 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 GRK1Q15835 563 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 FAM53AQ6NSI3 398 aaPredicted RBP8.62□□□□□ -1.03
TPM3-217ENST00000504663 ZNF782Q6ZMW2 699 aaPredicted RBP8.62□□□□□ -1.03
TPM3-217ENST00000504663 ZNF841Q6ZN19 808 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 IDO2Q6ZQW0 420 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 MOB1BQ7L9L4 216 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 SLC36A1Q7Z2H8 476 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 C1orf87Q8N0U7 546 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 ASCC1Q8N9N2 400 aaKnown RBP8.62□□□□□ -1.03
TPM3-217ENST00000504663 OR5H2Q8NGV7 314 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 CCDC107Q8WV48 283 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 TMEM230Q96A57 120 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 TOLLIPQ9H0E2 274 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 RAB1BQ9H0U4 201 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 FAM234AQ9H0X4 552 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 NCOR1P1Q9H4R4 102 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 ZNF665Q9H7R5 613 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 EHFQ9NZC4 300 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 GLS2Q9UI32 602 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 KIAA2026Q5HYC2 2103 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 CRYBG3Q68DQ2 2970 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 GCN1Q92616 2671 aaKnown RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 ABCA2Q9BZC7 2435 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 TRBV6-7A0A0A0MS04 114 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 TRAV38-1A0A0B4J264 116 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 ODAMA1E959 279 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 FUOMA2VDF0 154 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 F5H0A9 414 aaPredicted RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 INMT-MINDY4F8WBC2 141 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 ARPC1BO15143 372 aaKnown RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 IGHV4-39P01824 125 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 H2AFB2P0C5Z0 115 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 OR5H8P0DN80 308 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 COX6B1P14854 86 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 DAOP14920 347 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 ERP29P30040 261 aaKnown RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 RAG2P55895 527 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 KRTAP10-9P60411 292 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 RBMS2Q15434 407 aaKnown RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 C17orf58Q2M2W7 97 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 HFEQ30201 348 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 CHRFAM7AQ494W8 412 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 KRBOX4Q5JUW0 171 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 UTF1Q5T230 341 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 PLET1Q6UQ28 207 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 DHRS11Q6UWP2 260 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 UBALD1Q8TB05 177 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 NRGNQ92686 78 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 C14orf79Q96F83 325 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 PRRT1Q99946 306 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 GINS4Q9BRT9 223 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 PARP12Q9H0J9 701 aaKnown RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 GHITMQ9H3K2 345 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 CHMP1AQ9HD42 196 aaPredicted RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 MYOZ1Q9NP98 299 aaPredicted RBP8.61□□□□□ -1.03
TPM3-217ENST00000504663 DLL4Q9NR61 685 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 ING3Q9NXR8 418 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 COPZ2Q9P299 210 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 ALG5Q9Y673 324 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 DOPEY2Q9Y3R5 2298 aa8.61□□□□□ -1.03
TPM3-217ENST00000504663 TACC2O95359 2948 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 IGKV1D-13A0A0B4J2D9 117 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 H7C1Q1 480 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 DIRAS3O95661 229 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 SCGB1D2O95969 90 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 IGKV1-13P0DP09 117 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 RPS2P15880 293 aaKnown RBP8.6□□□□□ -1.03
TPM3-217ENST00000504663 ANXA7P20073 488 aaKnown RBP8.6□□□□□ -1.03
TPM3-217ENST00000504663 FPR2P25090 351 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 SSTR5P35346 364 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 BCAP31P51572 246 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 EFNA4P52798 201 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 RAB25P57735 213 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 ARPC4P59998 168 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 IL13RA1P78552 427 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 TATDN3Q17R31 274 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 AVPI1Q5T686 147 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 H1FOOQ8IZA3 346 aaPredicted RBP8.6□□□□□ -1.03
TPM3-217ENST00000504663 OR4A4PQ8NGN8 299 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 OR1L1Q8NH94 360 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 TERB2Q8NHR7 220 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 MRGPRDQ8TDS7 321 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 GIMAP1Q8WWP7 306 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 MOB3AQ96BX8 217 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 TMPRSS13Q9BYE2 586 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 C5orf66Q9H5L9 145 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 LINC00574Q9H8X3 128 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 TAF9BQ9HBM6 251 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 NECAP2Q9NVZ3 263 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 OR1A1Q9P1Q5 309 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 GPR132Q9UNW8 380 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 PTPN13Q12923 2485 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 VPS13CQ709C8 3753 aa8.6□□□□□ -1.03
TPM3-217ENST00000504663 MEIKINA0A087WXM9 373 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 A0A0A6YYJ9 748 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms