RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 WNT2P09544 360 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 AMY2BP19961 511 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 MECP2P51608 486 aaKnown RBP13.43□□□□□ -0.26
LMNA-217ENST00000498722 VAX1Q5SQQ9 334 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 ATAD3CQ5T2N8 411 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 RTN4RL2Q86UN3 420 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 FAM90A1Q86YD7 464 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 BEST4Q8NFU0 473 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 OR4S1Q8NGB4 309 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 OR5H2Q8NGV7 314 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 OR10Z1Q8NGY1 313 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 SULT4A1Q9BR01 284 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 FAAP24Q9BTP7 215 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 TINAGL1Q9GZM7 467 aaPredicted RBP13.43□□□□□ -0.26
LMNA-217ENST00000498722 TMEM160Q9NX00 188 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 LPAR3Q9UBY5 353 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 CLN8Q9UBY8 286 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 AK3Q9UIJ7 227 aa13.43□□□□□ -0.26
LMNA-217ENST00000498722 C7orf66A4D0T2 115 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 SRRM5B3KS81 715 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 NOS1APO75052 506 aaPredicted RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 ZNF735P0CB33 412 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 PGA5P0DJD9 388 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 HOXB4P17483 251 aaPredicted RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 GLRA1P23415 457 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 ZFP36P26651 326 aaKnown RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 HRH1P35367 487 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 SRP14P37108 136 aaKnown RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 SNU13P55769 128 aaKnown RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 RAB25P57735 213 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 IKZF1Q13422 519 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 OR52W1Q6IF63 320 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 IDO2Q6ZQW0 420 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 TMEM17Q86X19 198 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 ARRDC1Q8N5I2 433 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 POC1AQ8NBT0 407 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 OR5T2Q8NGG2 359 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 GIMAP1Q8WWP7 306 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 SNAPC3Q92966 411 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 ST6GALNAC5Q9BVH7 336 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 WDR13Q9H1Z4 485 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 IFT22Q9H7X7 185 aa13.42□□□□□ -0.26
LMNA-217ENST00000498722 GPN1Q9HCN4 374 aaPredicted RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 RCC2Q9P258 522 aaKnown RBP13.42□□□□□ -0.26
LMNA-217ENST00000498722 MCRIP1C9JLW8 97 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 TMPRSS2O15393 492 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 NDUFA2O43678 99 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 CCNKO75909 580 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 IL5P05113 134 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 CFHR2P36980 270 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 OR3A3P47888 321 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 ERVK11-1P61568 191 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 RBM39Q14498 530 aaKnown RBP13.41□□□□□ -0.26
LMNA-217ENST00000498722 SPIN3Q5JUX0 258 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 METTL11BQ5VVY1 283 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 TEX36Q5VZQ5 186 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 BATF2Q8N1L9 274 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 MED30Q96HR3 178 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 SLC6A7Q99884 636 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 GLS2Q9UI32 602 aa13.41□□□□□ -0.26
LMNA-217ENST00000498722 A0A0A6YYJ9 748 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 NKX6-3A6NJ46 265 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 F8VVB4 439 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 F8VWA3 439 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.4□□□□□ -0.26
LMNA-217ENST00000498722 NXPH2O95156 264 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 PMP2P02689 132 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 SRD5A1P18405 259 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 RRAS2P62070 204 aaPredicted RBP13.4□□□□□ -0.26
LMNA-217ENST00000498722 SRSF7Q16629 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
LMNA-217ENST00000498722 SCGB2B2Q4G0G5 96 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 ZDHHC22Q8N966 263 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 OR5AP2Q8NGF4 316 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 CCDC107Q8WV48 283 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 DACT3Q96B18 629 aaPredicted RBP13.4□□□□□ -0.26
LMNA-217ENST00000498722 ZNF488Q96MN9 340 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 CCL13Q99616 98 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 NRIP2Q9BQI9 281 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 RIMS4Q9H426 269 aaPredicted RBP13.4□□□□□ -0.26
LMNA-217ENST00000498722 C12orf4Q9NQ89 552 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 CTSZQ9UBR2 303 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 FLVCR2Q9UPI3 526 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
LMNA-217ENST00000498722 UBE2QL1A1L167 161 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 KIAA1324LA8MWY0 1029 aaPredicted RBP13.39□□□□□ -0.27
LMNA-217ENST00000498722 CSN2P05814 226 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 FCGR3AP08637 254 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 GATA3P23771 443 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 GABRA2P47869 451 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 ARPC4P59998 168 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 TSPAN5P62079 268 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 GRK1Q15835 563 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 GLDNQ6ZMI3 551 aaPredicted RBP13.39□□□□□ -0.27
LMNA-217ENST00000498722 SLC36A1Q7Z2H8 476 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 SCGB3A2Q96PL1 93 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 ALX4Q9H161 411 aaPredicted RBP13.39□□□□□ -0.27
LMNA-217ENST00000498722 MED28Q9H204 178 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 OR51J1Q9H342 316 aa13.39□□□□□ -0.27
LMNA-217ENST00000498722 GHITMQ9H3K2 345 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms