RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 A0A1W2PPI3 338 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 TMEM30CPA0ZSE6 113 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 FGF16O43320 207 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 ZNF780AO75290 641 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 BAG2O95816 211 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 MPIG6BO95866 241 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 IGKV1D-33P01593 117 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 IGKV1-33P01594 117 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 GAPDHP04406 335 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 SERPINA2P20848 420 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 BDKRB2P30411 391 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 ETV1P50549 477 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 RIPK1Q13546 671 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 GPR176Q14439 515 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 HNF4GQ14541 408 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 SMN1Q16637 294 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 ATAD3CQ5T2N8 411 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 OR2G6Q5TZ20 316 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 MOB3BQ86TA1 216 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 STX19Q8N4C7 294 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 C5orf56Q8N8D9 126 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 NEK7Q8TDX7 302 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 GPR61Q9BZJ8 451 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 BABAM2Q9NXR7 383 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 CKLFQ9UBR5 152 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 ZNF281Q9Y2X9 895 aa9.33□□□□□ -0.92
NUDCD3-211ENST00000497978 TRAV39A0A0B4J263 110 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 A0A1W2PPE3 182 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 A6NHS1 94 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 SERPINE3A8MV23 424 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 CCRL2O00421 344 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 SDCBPO00560 298 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 HSD17B6O14756 317 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 GEMIN2O14893 280 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 OGG1O15527 345 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 WBP4O75554 376 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 GTF2F2P13984 249 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 IL3RAP26951 378 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 SLC35B1P78383 322 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 ZNF816Q0VGE8 651 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 DIAPH2-AS1Q14236 149 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 MPV17LQ2QL34 196 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 XAF1Q6GPH4 301 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 SLC35E3Q7Z769 313 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 FOXRED2Q8IWF2 684 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 OR52M1Q8NGK5 317 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 DPF1Q92782 380 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 ARL11Q969Q4 196 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 SMIM19Q96E16 107 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 RAB9BQ9NP90 201 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 ZFP57Q9NU63 452 aa9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 DIMT1Q9UNQ2 313 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 EXOSC1Q9Y3B2 195 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-211ENST00000497978 NCBP2LA6PVI3 153 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 NUDT19A8MXV4 375 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 ORC5O43913 435 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 SLC6A1P30531 599 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 RPL23AP62750 156 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 SLC22A6Q4U2R8 563 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 YIF1BQ5BJH7 314 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 COMMD1Q8N668 190 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 SETD9Q8NE22 299 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 CCDC107Q8WV48 283 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 GHSRQ92847 366 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 NOL4LQ96MY1 436 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 ZNF184Q99676 751 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 SPACA1Q9HBV2 294 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 ZNF581Q9P0T4 197 aa9.31□□□□□ -0.92
NUDCD3-211ENST00000497978 IGHV1-3A0A0C4DH29 117 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 TRBV5-5A0A0J9YX44 114 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 MCRIP1C9JLW8 97 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 C15orf65H3BRN8 121 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 AIPO00170 330 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 EBAG9O00559 213 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 IGHG2P01859 326 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 IGFBP3P17936 291 aaPredicted RBP9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 REG1BP48304 166 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 EBI3Q14213 229 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 Q3ZCU0 254 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 Q499Y3 187 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 DEFB121Q5J5C9 76 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 TTC23Q5W5X9 447 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 ZNF497Q6ZNH5 498 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 OR2W3Q7Z3T1 314 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 IZUMO1Q8IYV9 350 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 LINC00311Q8N616 119 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 LINC00482Q8N8I6 264 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 C8orf31Q8N9H6 132 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 OR2T10Q8NGZ9 312 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 MRPS24Q96EL2 167 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 TMEM80Q96HE8 168 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 EAF1Q96JC9 268 aaPredicted RBP9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 MCRIP2Q9BUT9 160 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 GON7Q9BXV9 100 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 GFOD1Q9NXC2 390 aa9.3□□□□□ -0.92
NUDCD3-211ENST00000497978 SIRT4Q9Y6E7 314 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms