RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 DHRS7BQ6IAN0 325 aaPredicted RBP13.32□□□□□ -0.28
SF3A1-209ENST00000496189 SLC35E4Q6ICL7 350 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 GPR141Q7Z602 305 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 CROCCP3Q8IVE0 287 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 OR4F5Q8NH21 305 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 MALSU1Q96EH3 234 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 SSX3Q99909 188 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 FUNDC2Q9BWH2 189 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 TM2D1Q9BX74 207 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 BEX1Q9HBH7 125 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 RAB18Q9NP72 206 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 RCC2Q9P258 522 aaKnown RBP13.32□□□□□ -0.28
SF3A1-209ENST00000496189 RAB22AQ9UL26 194 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 MINOS1-NBL1R4GNA1 71 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 KBTBD11-OT1A0A1B0GTJ5 212 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 H3BUX3 64 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 GPR137BO60478 399 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 TMEM127O75204 238 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 PDCD6O75340 191 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 CA11O75493 328 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 GZMHP20718 246 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 NFYBP25208 207 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 CEACAM3P40198 252 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 PRRX1P54821 245 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 MXD1Q05195 221 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 UNC119Q13432 240 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 AWAT1Q58HT5 328 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 RSBN1Q5VWQ0 802 aaPredicted RBP13.31□□□□□ -0.28
SF3A1-209ENST00000496189 ABHD12Q8N2K0 398 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 MEGF9Q9H1U4 602 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 CALYQ9NYX4 217 aa13.31□□□□□ -0.28
SF3A1-209ENST00000496189 DSCAML1Q8TD84 2053 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 SMIM30A4D0T7 59 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 ODF3BA8MYP8 253 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 OMGP23515 440 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 HTR1DP28221 377 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 RAG2P55895 527 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 NKAPLQ5M9Q1 402 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 SFXN4Q6P4A7 337 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 DTX3Q8N9I9 347 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 OR56B1Q8NGI3 324 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 PLPPR1Q8TBJ4 325 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 MRGPRDQ8TDS7 321 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 RNF167Q9H6Y7 350 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 ETAA1Q9NY74 926 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 DAPK2Q9UIK4 370 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 SCOCQ9UIL1 159 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 PITPNC1Q9UKF7 332 aa13.3□□□□□ -0.28
SF3A1-209ENST00000496189 TMEM272A0A1B0GTI8 110 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 METTL21EPA6NDL7 271 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 IL1AP01583 271 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 TFAP2AP05549 437 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 RAB6AP20340 208 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 BLVRBP30043 206 aaPredicted RBP13.29□□□□□ -0.28
SF3A1-209ENST00000496189 ALDH3B2P48448 385 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 LSM3P62310 102 aaKnown RBP13.29□□□□□ -0.28
SF3A1-209ENST00000496189 SSX2Q16385 188 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 BRICD5Q6PL45 260 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 LIAT1Q6ZQX7 453 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 LHFPL4Q7Z7J7 247 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 FAM89BQ8N5H3 189 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 OR10A7Q8NGE5 316 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 OR13A1Q8NGR1 328 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 PTX4Q96A99 478 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 LPAR5Q9H1C0 372 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 KCNK15Q9H427 330 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 PLEKHJ1Q9NW61 149 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 IDI2-AS1Q9NZ38 188 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 ZNF581Q9P0T4 197 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 TRAPPC2LQ9UL33 140 aa13.29□□□□□ -0.28
SF3A1-209ENST00000496189 AMMECR1Q9Y4X0 333 aaPredicted RBP13.29□□□□□ -0.28
SF3A1-209ENST00000496189 POM121CA8CG34 1229 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 F2RL2O00254 374 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 LDLRAD4O15165 306 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 NDUFA7O95182 113 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 SLC2A2P11168 524 aaPredicted RBP13.28□□□□□ -0.28
SF3A1-209ENST00000496189 CHATP28329 748 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 RPL5P46777 297 aaKnown RBP13.28□□□□□ -0.28
SF3A1-209ENST00000496189 SCAND1P57086 179 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 C6orf183Q5T699 404 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 IDNKQ5T6J7 187 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 SIGIRRQ6IA17 410 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 TRAT1Q6PIZ9 186 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 ZNF497Q6ZNH5 498 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 NR2C2APQ86WQ0 139 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 ANKRD13BQ86YJ7 626 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 OR9G1Q8NH87 305 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 C17orf50Q8WW18 174 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 HILPDAQ9Y5L2 63 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 STAB1Q9NY15 2570 aa13.28□□□□□ -0.28
SF3A1-209ENST00000496189 UBE2QL1A1L167 161 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 FAM172BPA6NC97 362 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 LEUTXA8MZ59 168 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 SPINT2O43291 252 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 MMP23AO75900 390 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 MT-ND4P03905 459 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 CLEC2LP0C7M8 214 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 BRS3P32247 399 aa13.27□□□□□ -0.29
SF3A1-209ENST00000496189 SERPINB10P48595 397 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms