RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 OBSL1O75147 1896 aa2.37□□□□□ -2.03
SMC4-224ENST00000494612 HELZP42694 1942 aaKnown RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 NID2Q14112 1375 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 CITO14578 2027 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 FLNBO75369 2602 aaKnown RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 LOC102724200A0A096LPH7 203 aaPredicted RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 ISPDA4D126 451 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 TVP23AA6NH52 213 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 ZNF98A6NK75 572 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 SEC14L6B5MCN3 397 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 LINC01619G3V211 115 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 DFFAO00273 331 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 CCDC22O60826 627 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 LYPLA2O95372 231 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 LCA5LO95447 670 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 TACSTD2P09758 323 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 GFAPP14136 432 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 KCNE1P15382 129 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 BGNP21810 368 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 PSMB5P28074 263 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 IL12BP29460 328 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 PCK1P35558 622 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 RANBP1P43487 201 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 UBE2KP61086 200 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 PPP1CAP62136 330 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 ELF3P78545 371 aaPredicted RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 STX3Q13277 289 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 FAM222AQ5U5X8 452 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 THOC7Q6I9Y2 204 aaKnown RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 ALKAL1Q6UXT8 129 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 OR2Z1Q8NG97 314 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 OR6N2Q8NGY6 317 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 ENKURQ8TC29 256 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 SPPL2BQ8TCT7 592 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 C2orf15Q8WU43 125 aaKnown RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 PDCD6IPQ8WUM4 868 aaKnown RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 S100PBPQ96BU1 408 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 TRNT1Q96Q11 434 aaKnown RBP2.36□□□□□ -2.03
SMC4-224ENST00000494612 EMC6Q9BV81 110 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 SFXN3Q9BWM7 321 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 NDEL1Q9GZM8 345 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 OR51B2Q9Y5P1 312 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 ANK1P16157 1881 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 ANKRD12Q6UB98 2062 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 PCNX2A6NKB5 2137 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 PI4KAP42356 2102 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 DENND4CQ5VZ89 1909 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 ATMQ13315 3056 aa2.36□□□□□ -2.03
SMC4-224ENST00000494612 TCHHQ07283 1943 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 MAST4O15021 2626 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 TRAV8-7A0A075B6U6 113 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 NBPF19A0A087WUL8 3843 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 K7EN84 100 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 MYL12BO14950 172 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 SCO1O75880 301 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 VAPBO95292 243 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 DEXIO95424 95 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 LDOC1O95751 146 aaPredicted RBP2.35□□□□□ -2.03
SMC4-224ENST00000494612 CXCL8P10145 99 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 NQO2P16083 231 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 HMGA1P17096 107 aaKnown RBP2.35□□□□□ -2.03
SMC4-224ENST00000494612 NTF3P20783 257 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 MAP3K7CLP57077 242 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 MTPNP58546 118 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 RPL10AP62906 217 aaKnown RBP2.35□□□□□ -2.03
SMC4-224ENST00000494612 TPM4P67936 248 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 SLC35A1P78382 337 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 RPL18AQ02543 176 aaKnown RBP2.35□□□□□ -2.03
SMC4-224ENST00000494612 TNXAQ16473 311 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 TAL2Q16559 108 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 HES3Q5TGS1 186 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 SDHAF4Q5VUM1 108 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 STEAP4Q687X5 459 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 MED27Q6P2C8 311 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 SELENOHQ8IZQ5 122 aaKnown RBP2.35□□□□□ -2.03
SMC4-224ENST00000494612 SLC35G3Q8N808 338 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 SPANXA2-OT1Q8N9U9 137 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 CYB561A3Q8NBI2 242 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 MNS1Q8NEH6 495 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 OR51A7Q8NH64 312 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 OR1S1Q8NH92 325 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 CLHC1Q8NHS4 586 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 ANGPTL6Q8NI99 470 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 ERMNQ8TAM6 284 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 LGALS14Q8TCE9 139 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 FAM19A4Q96LR4 140 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 COPS4Q9BT78 406 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 CA10Q9NS85 328 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 TREX1Q9NSU2 369 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 POFUT2Q9Y2G5 429 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 ENPP4Q9Y6X5 453 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 COL12A1Q99715 3063 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 TMEM131Q92545 1883 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 HELZ2Q9BYK8 2649 aaKnown RBP2.35□□□□□ -2.03
SMC4-224ENST00000494612 BSNQ9UPA5 3926 aa2.35□□□□□ -2.03
SMC4-224ENST00000494612 URB1O60287 2271 aaKnown RBP2.34□□□□□ -2.03
SMC4-224ENST00000494612 TRPC5OSA6NMA1 111 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 H7C2Y5 167 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 PSPHP1O15172 72 aa2.34□□□□□ -2.03
SMC4-224ENST00000494612 SLC16A4O15374 487 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms