RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 ARL11Q969Q4 196 aa17.64■□□□□ 0.41
HPS3-207ENST00000494327 Q96M66 194 aa17.64■□□□□ 0.41
HPS3-207ENST00000494327 NPFFR1Q9GZQ6 430 aa17.64■□□□□ 0.41
HPS3-207ENST00000494327 RCC2Q9P258 522 aaKnown RBP17.64■□□□□ 0.41
HPS3-207ENST00000494327 PITPNC1Q9UKF7 332 aa17.64■□□□□ 0.41
HPS3-207ENST00000494327 UBE2QL1A1L167 161 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 UBBP0CG47 229 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 FUT3P21217 361 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 CD24P25063 80 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 PSMA1P25786 263 aaKnown RBP17.63■□□□□ 0.41
HPS3-207ENST00000494327 CEACAM3P40198 252 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 GNG10P50151 68 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 DYNLT3P51808 116 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 C1orf100Q5SVJ3 147 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 ZNF497Q6ZNH5 498 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 ZNF367Q7RTV3 350 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 OR4K15Q8NH41 348 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 CREB3L1Q96BA8 519 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 MMP28Q9H239 520 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 LINC00574Q9H8X3 128 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 ACOT13Q9NPJ3 140 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 FBLN5Q9UBX5 448 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 TRAPPC2LQ9UL33 140 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 PSG11Q9UQ72 335 aa17.63■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A10PA6NDY2 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A18PA6NE21 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A16PA6NEW6 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A20PA6NIJ5 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A7PA6NKC0 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A22PA8MWA6 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A12PA8MX19 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A5PA8MXJ8 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A23PA8MXZ1 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 J3QR06 171 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 ARL6IP5O75915 188 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A15PP0C7V4 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A13PP0C7W8 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A14PP0C7W9 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FAM90A24PP0C7X0 464 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 VSIG8P0DPA2 414 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 HTR2CP28335 458 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 KIR2DS4P43632 304 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 FABP5Q01469 135 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 TPTE2P1Q5T6R2 138 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 OR10A7Q8NGE5 316 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 OR2T6Q8NHC8 308 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 CYYR1Q96J86 154 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 CITED1Q99966 193 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 KCNK15Q9H427 330 aa17.62■□□□□ 0.41
HPS3-207ENST00000494327 AK6Q9Y3D8 172 aaKnown RBP17.62■□□□□ 0.41
HPS3-207ENST00000494327 A0A1W2PPE3 182 aa17.61■□□□□ 0.41
HPS3-207ENST00000494327 CALRP27797 417 aaKnown RBP17.61■□□□□ 0.41
HPS3-207ENST00000494327 BRS3P32247 399 aa17.61■□□□□ 0.41
HPS3-207ENST00000494327 ARHGDIBP52566 201 aa17.61■□□□□ 0.41
HPS3-207ENST00000494327 EMX1Q04741 257 aaPredicted RBP17.61■□□□□ 0.41
HPS3-207ENST00000494327 NKAPLQ5M9Q1 402 aa17.61■□□□□ 0.41
HPS3-207ENST00000494327 SYT6Q5T7P8 510 aaPredicted RBP17.61■□□□□ 0.41
HPS3-207ENST00000494327 SIGIRRQ6IA17 410 aa17.61■□□□□ 0.41
HPS3-207ENST00000494327 RANBP3Q9H6Z4 567 aaPredicted RBP17.61■□□□□ 0.41
HPS3-207ENST00000494327 ZNF696Q9H7X3 374 aa17.61■□□□□ 0.41
HPS3-207ENST00000494327 PLGRKTQ9HBL7 147 aa17.61■□□□□ 0.41
HPS3-207ENST00000494327 AMMECR1Q9Y4X0 333 aaPredicted RBP17.61■□□□□ 0.41
HPS3-207ENST00000494327 H3BUI4 141 aa17.6■□□□□ 0.41
HPS3-207ENST00000494327 SDCBPO00560 298 aaPredicted RBP17.6■□□□□ 0.41
HPS3-207ENST00000494327 GABARAPL2P60520 117 aa17.6■□□□□ 0.41
HPS3-207ENST00000494327 P2RY14Q15391 338 aa17.6■□□□□ 0.41
HPS3-207ENST00000494327 OR6M1Q8NGM8 313 aa17.6■□□□□ 0.41
HPS3-207ENST00000494327 RPEQ96AT9 228 aa17.6■□□□□ 0.41
HPS3-207ENST00000494327 NEDD4LQ96PU5 975 aa17.6■□□□□ 0.41
HPS3-207ENST00000494327 TMEM59Q9BXS4 323 aa17.6■□□□□ 0.41
HPS3-207ENST00000494327 IGHV3-43A0A0B4J1X8 118 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 LY6LH3BQJ8 138 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 C15orf65H3BRN8 121 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 SLC22A1O15245 554 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 ORC5O43913 435 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 PDCD6O75340 191 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 IGHV3-43DP0DP04 118 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 MNDAP41218 407 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 HABP2Q14520 560 aaPredicted RBP17.59■□□□□ 0.41
HPS3-207ENST00000494327 SSX1Q16384 188 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 PRR31Q5SQ13 230 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 PRR18Q8N4B5 295 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 SVOPQ8N4V2 548 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 KCNG3Q8TAE7 436 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 TOMM40LQ969M1 308 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 GFI1Q99684 422 aa17.59■□□□□ 0.41
HPS3-207ENST00000494327 GLAP06280 429 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 EFNB2P52799 333 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 RPS27AP62979 156 aaKnown RBP17.58■□□□□ 0.4
HPS3-207ENST00000494327 ARSJQ5FYB0 599 aaPredicted RBP17.58■□□□□ 0.4
HPS3-207ENST00000494327 FAM53AQ6NSI3 398 aaPredicted RBP17.58■□□□□ 0.4
HPS3-207ENST00000494327 CCDC144NLQ6NUI1 221 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 SLC16A12Q6ZSM3 486 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 DTX3Q8N9I9 347 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 OR10X1Q8NGY0 326 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 NICN1Q9BSH3 213 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 ZNF702PQ9H963 129 aa17.58■□□□□ 0.4
HPS3-207ENST00000494327 OOSP1A8MZH6 123 aa17.57■□□□□ 0.4
HPS3-207ENST00000494327 C12orf77C9JDV5 145 aa17.57■□□□□ 0.4
HPS3-207ENST00000494327 SPINT2O43291 252 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms