RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 IL1AP01583 271 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 GDNFP39905 211 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 EFNB2P52799 333 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 PLA2G7Q13093 441 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 C6orf183Q5T699 404 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 IDNKQ5T6J7 187 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 ZNF626Q68DY1 528 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 BAIAP2L2Q6UXY1 529 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 RTN4RL2Q86UN3 420 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 KCNIP1Q9NZI2 227 aa11.37□□□□□ -0.59
CCM2-217ENST00000492883 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 SPINT2O43291 252 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 ORC5O43913 435 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 MELTFP08582 738 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 RAB6AP20340 208 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 SSTR5P35346 364 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 TGFBR1P36897 503 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 PRRX1P54821 245 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 TMEM50BP56557 158 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
CCM2-217ENST00000492883 SLC9A3R2Q15599 337 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 KRTAP24-1Q3LI83 254 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 GPR141Q7Z602 305 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 OR10A7Q8NGE5 316 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 ZNF596Q8TC21 504 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 C17orf50Q8WW18 174 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 SSMEM1Q8WWF3 244 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 ARHGAP5-AS1Q96IT6 56 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 KIRREL1Q96J84 757 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 ATG5Q9H1Y0 275 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 DPAGT1Q9H3H5 408 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 CHMP1AQ9HD42 196 aaPredicted RBP11.36□□□□□ -0.59
CCM2-217ENST00000492883 RAB9BQ9NP90 201 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 HSF4Q9ULV5 492 aa11.36□□□□□ -0.59
CCM2-217ENST00000492883 TBL2Q9Y4P3 447 aaKnown RBP11.36□□□□□ -0.59
CCM2-217ENST00000492883 NSD1Q96L73 2696 aaPredicted RBP11.36□□□□□ -0.59
CCM2-217ENST00000492883 BTBD17A6NE02 478 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 C15orf65H3BRN8 121 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 CLDN34H7C241 214 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 TFAP2AP05549 437 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 SNRPBP14678 240 aaKnown RBP11.35□□□□□ -0.59
CCM2-217ENST00000492883 RCC1P18754 421 aaPredicted RBP11.35□□□□□ -0.59
CCM2-217ENST00000492883 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 LHFPL4Q7Z7J7 247 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 LDLRAD3Q86YD5 345 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 GAPTQ8N292 157 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 PRR18Q8N4B5 295 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 BEND2Q8NDZ0 799 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 OR10R2Q8NGX6 335 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 UBALD1Q8TB05 177 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 NDNFQ8TB73 568 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 SETD6Q8TBK2 473 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 MRPL30Q8TCC3 161 aaKnown RBP11.35□□□□□ -0.59
CCM2-217ENST00000492883 ZFAND2BQ8WV99 257 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 PTX4Q96A99 478 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 RAB3CQ96E17 227 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 MALSU1Q96EH3 234 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 MDFIQ99750 246 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 PECRQ9BY49 303 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 RIMS4Q9H426 269 aaPredicted RBP11.35□□□□□ -0.59
CCM2-217ENST00000492883 ZMAT3Q9HA38 289 aaKnown RBP11.35□□□□□ -0.59
CCM2-217ENST00000492883 ZNF286AQ9HBT8 521 aa11.35□□□□□ -0.59
CCM2-217ENST00000492883 A0A087X0M5 115 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 A0A1B0GX30 115 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 FOXI3A8MTJ6 420 aaPredicted RBP11.34□□□□□ -0.59
CCM2-217ENST00000492883 C12orf77C9JDV5 145 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 SDCBPO00560 298 aaPredicted RBP11.34□□□□□ -0.59
CCM2-217ENST00000492883 IGHV3-7P01780 117 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 PAX6P26367 422 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 HTR1DP28221 377 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 CD34P28906 385 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 RPS19P39019 145 aaKnown RBP11.34□□□□□ -0.59
CCM2-217ENST00000492883 IER3P46695 156 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 ALDH3B2P48448 385 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 SERPINB10P48595 397 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 VBP1P61758 197 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 NCS1P62166 190 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
CCM2-217ENST00000492883 SSX2Q16385 188 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 MOGAT2Q3SYC2 334 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 PLAC9Q5JTB6 97 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 MINOS1Q5TGZ0 78 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 GPR107Q5VW38 600 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 CROCCP3Q8IVE0 287 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 TMEM86BQ8N661 226 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 OR9G1Q8NH87 305 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 FAM216AQ8WUB2 273 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 LEAP2Q969E1 77 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 TAF9BQ9HBM6 251 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 AK3Q9UIJ7 227 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 MINOS1-NBL1R4GNA1 71 aa11.34□□□□□ -0.59
CCM2-217ENST00000492883 DOCK11Q5JSL3 2073 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms