RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LEUTXA8MZ59 168 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 CGB3P0DN86 165 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 CGB7P0DN87 165 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 SSTR5P35346 364 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 RANBP1P43487 201 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 LDLRAD2Q5SZI1 272 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 ZNF497Q6ZNH5 498 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 LIAT1Q6ZQX7 453 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 OR4P4Q8NGL7 312 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 OR9G1Q8NH87 305 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 ARL11Q969Q4 196 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 NEDD4LQ96PU5 975 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 TMEM59Q9BXS4 323 aa10.82□□□□□ -0.68
CCL28-202ENST00000489442 PKD1L1Q8TDX9 2849 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 UBE2QL1A1L167 161 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 SLC22A1O15245 554 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 PDCD6O75340 191 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 BPNT1O95861 308 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 IGHV3-7P01780 117 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 MT-ND4P03905 459 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 GLAP06280 429 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 VSIG8P0DPA2 414 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 ARSBP15848 533 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 PSMB9P28065 219 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 CD34P28906 385 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 BRS3P32247 399 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 PSMD7P51665 324 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 RAB11BQ15907 218 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 HLA-DRB5Q30154 266 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 NKAPLQ5M9Q1 402 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 OR10K2Q6IF99 312 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 Q6ZSV7 163 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 SPARTQ8N0X7 666 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 OR10A7Q8NGE5 316 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 OR4C13Q8NGP0 309 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 OR4K15Q8NH41 348 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 SGMS2Q8NHU3 365 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 LINC01006Q8NI28 216 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 LEAP2Q969E1 77 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 RAB9BQ9NP90 201 aa10.81□□□□□ -0.68
CCL28-202ENST00000489442 RCC2Q9P258 522 aaKnown RBP10.81□□□□□ -0.68
CCL28-202ENST00000489442 AMMECR1Q9Y4X0 333 aaPredicted RBP10.81□□□□□ -0.68
CCL28-202ENST00000489442 A0A087X0M5 115 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 A0A1B0GX30 115 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 NPIPB11E5RHQ5 1161 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 BUB1B-PAK6H3BSN5 160 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 CCRL2O00421 344 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 SLC17A2O00624 439 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 PDCD5O14737 125 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 SPINT2O43291 252 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 CA11O75493 328 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 TSPAN9O75954 239 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 IGLV1-47P01700 117 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 MYL9P24844 172 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 GNG10P50151 68 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 DYNLT3P51808 116 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 RPS27AP62979 156 aaKnown RBP10.8□□□□□ -0.68
CCL28-202ENST00000489442 P2RY14Q15391 338 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 SSX1Q16384 188 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 C6orf183Q5T699 404 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 SYT6Q5T7P8 510 aaPredicted RBP10.8□□□□□ -0.68
CCL28-202ENST00000489442 DTX3Q8N9I9 347 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 UBALD1Q8TB05 177 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 PIFOQ8TCI5 191 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 FCGR1BQ92637 280 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 URM1Q9BTM9 101 aaKnown RBP10.8□□□□□ -0.68
CCL28-202ENST00000489442 NPFFR1Q9GZQ6 430 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 MMP28Q9H239 520 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 C16orf95Q9H693 158 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 LINC00574Q9H8X3 128 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 NDUFB11Q9NX14 153 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 KCNIP1Q9NZI2 227 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 TCF19Q9Y242 345 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 V9GY05 133 aa10.8□□□□□ -0.68
CCL28-202ENST00000489442 J3QR06 171 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 SDCBPO00560 298 aaPredicted RBP10.79□□□□□ -0.68
CCL28-202ENST00000489442 ORC5O43913 435 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 JUNBP17275 347 aaPredicted RBP10.79□□□□□ -0.68
CCL28-202ENST00000489442 MNDAP41218 407 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 TPTE2P1Q5T6R2 138 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 UBE2UQ5VVX9 321 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 SIGIRRQ6IA17 410 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 CCDC144NLQ6NUI1 221 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 TRAT1Q6PIZ9 186 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 ZNF773Q6PK81 442 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 SLC16A12Q6ZSM3 486 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 TMEM219Q86XT9 240 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 PRR18Q8N4B5 295 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 OR10X1Q8NGY0 326 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 OR2T6Q8NHC8 308 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 CAPSLQ8WWF8 208 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 RPEQ96AT9 228 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 KCNK15Q9H427 330 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 PSG11Q9UQ72 335 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 MGAM2Q2M2H8 2515 aa10.79□□□□□ -0.68
CCL28-202ENST00000489442 TRDV1A0A1B0GX56 115 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 A6NDX4 124 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 CHST1O43916 411 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 CD37P11049 281 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 BLVRBP30043 206 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms