RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 VAX2Q9UIW0 290 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 ZNF257Q9Y2Q1 563 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 ZNF780BQ9Y6R6 833 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 ASTN1O14525 1302 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 PTPRJQ12913 1337 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 OVOS2A0A0J9YW53 1432 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 OVOS2Q6IE36 1432 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 FGD6Q6ZV73 1430 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 MYO15BQ96JP2 1530 aa2.3□□□□□ -2.04
RBM28-207ENST00000488249 PRRC2AP48634 2157 aaKnown RBP2.3□□□□□ -2.04
RBM28-207ENST00000488249 MYH10P35580 1976 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 MTCL1Q9Y4B5 1905 aaKnown RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 RAPGEF2Q9Y4G8 1499 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 WRNQ14191 1432 aaPredicted RBP eCLIP2.29□□□□□ -2.04
RBM28-207ENST00000488249 A0A087WX48 190 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 TRAV8-4A0A0B4J246 113 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 A0A0U1RQV1 116 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 ZNF726A6NNF4 738 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 B4DXG7 233 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 EEF1E1-BLOC1S5C9J1V9 151 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 J3QT63 122 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 K7EQS6 105 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 EEF1E1O43324 174 aaKnown RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 ZNF207O43670 478 aaKnown RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 GCM2O75603 506 aaPredicted RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 SCRG1O75711 98 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 YIF1AO95070 293 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 NUDT14O95848 222 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 MOSP00540 346 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 P01737 135 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 TTRP02766 147 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 CD55P08174 381 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 OR5G3P0C626 314 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 SLC35G6P0C7Q6 338 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 METTL15P1P0C7V9 234 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 ATF1P18846 271 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 MIPP30301 263 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 FMO3P31513 532 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 PFN2P35080 140 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 MYCNOSP40205 109 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 KIR2DS2P43631 304 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 PPICP45877 212 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 GPR6P46095 362 aaPredicted RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 MTPNP58546 118 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 RPS20P60866 119 aaKnown RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 MAXP61244 160 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 IGLV3-21P80748 117 aaPredicted RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 HPCAP84074 193 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 NDPQ00604 133 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 MXD1Q05195 221 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 PMVKQ15126 192 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 TNFAIP8L3Q5GJ75 292 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 C1orf194Q5T5A4 169 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 SPATA31B1PQ5VZV4 182 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 FAM219BQ5XKK7 198 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 LAMTOR1Q6IAA8 161 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 CGB2Q6NT52 195 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 CNIH2Q6PI25 160 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 PLET1Q6UQ28 207 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 Q6ZN92 141 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 STRADAQ7RTN6 431 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 TGIF2LYQ8IUE0 185 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 OR10D3Q8NH80 312 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 ACOT12Q8WYK0 555 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 FGF14Q92915 247 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 TMEM230Q96A57 120 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 APOBEC3DQ96AK3 386 aaPredicted RBP2.29□□□□□ -2.04
RBM28-207ENST00000488249 PIK3IP1Q96FE7 263 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 REEP6Q96HR9 211 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 CAPZA3Q96KX2 299 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 CCDC115Q96NT0 180 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 BIRC8Q96P09 236 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 OR5M11Q96RB7 305 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 OR52B2Q96RD2 323 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 PITX2Q99697 317 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 SULT4A1Q9BR01 284 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 EBPLQ9BY08 206 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 SLC17A9Q9BYT1 436 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 OR51E2Q9H255 320 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 ZDHHC11Q9H8X9 412 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 NIT2Q9NQR4 276 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 PLSCR3Q9NRY6 295 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 DNAJC27Q9NZQ0 273 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 HSPB8Q9UJY1 196 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 GNG8Q9UK08 70 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 CELA1Q9UNI1 258 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 HDGFL3Q9Y3E1 203 aa2.29□□□□□ -2.04
RBM28-207ENST00000488249 CACNA1SQ13698 1873 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 GRIN2BQ13224 1484 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 BCL9O00512 1426 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 MIA2Q96PC5 1412 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 DHX57Q6P158 1386 aaKnown RBP2.28□□□□□ -2.04
RBM28-207ENST00000488249 IGHV3OR16-12A0A075B7B8 117 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 MEIKINA0A087WXM9 373 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 A0A096LPI6 279 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 IGLV1-36A0A0B4J1U3 117 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 IGKV1D-13A0A0B4J2D9 117 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 FAM236DA0A1B0GTK5 79 aa2.28□□□□□ -2.04
RBM28-207ENST00000488249 RBMY1BA6NDE4 496 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms