RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 GEMIN2O14893 280 aaKnown RBP5.62□□□□□ -1.51
VPS50-218ENST00000485994 CHST1O43916 411 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 CDRT1O95170 752 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 IL1AP01583 271 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 MT-ND4P03905 459 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 UBBP0CG47 229 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 SRMP19623 302 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 RANBP1P43487 201 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 HSPA13P48723 471 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 RAB13P51153 203 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 ARHGDIBP52566 201 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 GP2P55259 537 aaKnown RBP5.62□□□□□ -1.51
VPS50-218ENST00000485994 SNU13P55769 128 aaKnown RBP5.62□□□□□ -1.51
VPS50-218ENST00000485994 SRSF4Q08170 494 aaKnown RBP5.62□□□□□ -1.51
VPS50-218ENST00000485994 TPBGQ13641 420 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 RBM39Q14498 530 aaKnown RBP5.62□□□□□ -1.51
VPS50-218ENST00000485994 SPHARQ15513 63 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 LY6EQ16553 131 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 TMEM30BQ3MIR4 351 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 PIGYQ3MUY2 71 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 ACSM3Q53FZ2 586 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 STEAP3Q658P3 488 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 ZNF497Q6ZNH5 498 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 AHSA2Q719I0 299 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 ZNF554Q86TJ5 538 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 LINC00311Q8N616 119 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 NKAIN3Q8N8D7 197 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 OR13A1Q8NGR1 328 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 OR13C5Q8NGS8 318 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 NDNFQ8TB73 568 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 PLPPR1Q8TBJ4 325 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 AKR1E2Q96JD6 320 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 OR14A2Q96R54 314 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 MMP28Q9H239 520 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 PPIL3Q9H2H8 161 aaKnown RBP5.62□□□□□ -1.51
VPS50-218ENST00000485994 MMP27Q9H306 513 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 VCX3BQ9H321 246 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 ZNF702PQ9H963 129 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 LIN7BQ9HAP6 207 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 ZNF286AQ9HBT8 521 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 RAB9BQ9NP90 201 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 SERTAD4Q9NUC0 356 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 CALYQ9NYX4 217 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 IDI2-AS1Q9NZ38 188 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 HILPDAQ9Y5L2 63 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 MEIKINA0A087WXM9 373 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 MEX3AA1L020 520 aaKnown RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 MCRIP1C9JLW8 97 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 C15orf65H3BRN8 121 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 M0QZK8 103 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 F2RL2O00254 374 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 MRPS14O60783 128 aaKnown RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 OR7C1O76099 320 aaPredicted RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 OR2F2O95006 317 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 UCHL1P09936 223 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 FUT3P21217 361 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 PAX6P26367 422 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 GDNFP39905 211 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 MNDAP41218 407 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 RAB7AP51149 207 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 EMX1Q04741 257 aaPredicted RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 EBI3Q14213 229 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 HABP2Q14520 560 aaPredicted RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 ATXN7L3Q14CW9 347 aaPredicted RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 TRAM1Q15629 374 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 SLC22A6Q4U2R8 563 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 LY6G6FQ5SQ64 297 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 TPTE2P1Q5T6R2 138 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 PRAMEF5Q5TYX0 476 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 GLT8D1Q68CQ7 371 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 TRAT1Q6PIZ9 186 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 GLIPR1L1Q6UWM5 242 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 BAIAP2L2Q6UXY1 529 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 Q6ZTK2 550 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 PRSS48Q7RTY5 328 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 OR8H3Q8N146 312 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 ZFP41Q8N8Y5 198 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 OR10K1Q8NGX5 313 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 ORAI1Q96D31 301 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 Q96M66 194 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 RBM14Q96PK6 669 aaKnown RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 PSG11Q9UQ72 335 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 MRPS28Q9Y2Q9 187 aaKnown RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 AMMECR1Q9Y4X0 333 aaPredicted RBP5.61□□□□□ -1.51
VPS50-218ENST00000485994 LRRC42Q9Y546 428 aa5.61□□□□□ -1.51
VPS50-218ENST00000485994 TMEM30CPA0ZSE6 113 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 MAGEA13PA6NCF6 341 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 CCRL2O00421 344 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 BPNT1O95861 308 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 MAS1P04201 325 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 FAM106CPP0CH98 169 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 MGMTP16455 207 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 CPEP16870 476 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 SERPINA2P20848 420 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 CRHBPP24387 322 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 PSMA1P25786 263 aaKnown RBP5.6□□□□□ -1.51
VPS50-218ENST00000485994 ZNF137PP52743 207 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 LOXL3P58215 753 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 BLCAPP62952 87 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms