RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	COX7A1	P24310	79 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	CDK2	P24941	298 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	TMEM50B	P56557	158 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	KLRD1	Q13241	179 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	C6orf183	Q5T699	404 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	OR52W1	Q6IF63	320 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	BRD3OS	Q6XYD6	125 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	C11orf42	Q8N5U0	333 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	OR13D1	Q8NGV5	346 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	OR5H6	Q8NGV6	325 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	SETD6	Q8TBK2	473 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	C22orf15	Q8WYQ4	148 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	TNFRSF14	Q92956	283 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	ARL11	Q969Q4	196 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	KCTD12	Q96CX2	325 aa	Known RBP	11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	RIMS4	Q9H426	269 aa	Predicted RBP	11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	UNKL	Q9H9P5	680 aa	Known RBP	11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	RHBDL2	Q9NX52	303 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	CALY	Q9NYX4	217 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	ZNF69	Q9UC07	566 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	SPATA2	Q9UM82	520 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	SESN1	Q9Y6P5	492 aa		11.32	□□□□□ -0.6
SCAP-211	ENST00000485967	RNASEK-C17orf49	H0YIS7	233 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	CD3G	P09693	182 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	OMG	P23515	440 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	NFYB	P25208	207 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	SOX6	P35712	828 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	UBE2E1	P51965	193 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	LGALS4	P56470	323 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	DYNC1I2	Q13409	638 aa	Known RBP	11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	ARL6IP1	Q15041	203 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	LTC4S	Q16873	150 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	MOGAT2	Q3SYC2	334 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	PRAMEF5	Q5TYX0	476 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	RUSC1-AS1	Q66K80	236 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	TRAT1	Q6PIZ9	186 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	HEPN1	Q6WQI6	88 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	PNKD	Q8N490	385 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	RFESD	Q8TAC1	157 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	CMSS1	Q9BQ75	279 aa	Known RBP	11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	SUCNR1	Q9BXA5	334 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	RAB9B	Q9NP90	201 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	DIABLO	Q9NR28	239 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	COMMD3	Q9UBI1	195 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	AK3	Q9UIJ7	227 aa		11.31	□□□□□ -0.6
SCAP-211	ENST00000485967	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	RAB27B	O00194	218 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	NPFF	O15130	113 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	SPINT2	O43291	252 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	ORC5	O43913	435 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	GNB3	P16520	340 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	ZNF182	P17025	639 aa	Predicted RBP	11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	TALDO1	P37837	337 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	ARFRP1	Q13795	201 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	SPCS2	Q15005	226 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	C17orf58	Q2M2W7	97 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	KRTAP24-1	Q3LI83	254 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	CDNF	Q49AH0	187 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	PLAC9	Q5JTB6	97 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	MZT2A	Q6P582	158 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	RBMS3	Q6XE24	437 aa	Known RBP	11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	SAMD12	Q8N8I0	201 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	MRPL30	Q8TCC3	161 aa	Known RBP	11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	ACOT12	Q8WYK0	555 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	AP3S1	Q92572	193 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	ISOC1	Q96CN7	298 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	S100A16	Q96FQ6	103 aa	Known RBP	11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	TMEM133	Q9H2Q1	129 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	ZMAT3	Q9HA38	289 aa	Known RBP	11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	IDI2-AS1	Q9NZ38	188 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	FAM96B	Q9Y3D0	163 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	CEPT1	Q9Y6K0	416 aa		11.3	□□□□□ -0.6
SCAP-211	ENST00000485967	MEIOC	A2RUB1	952 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	MMP23A	O75900	390 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	CGB3	P0DN86	165 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	CGB7	P0DN87	165 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	HIST1H1D	P16402	221 aa	Known RBP	11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	RCC1	P18754	421 aa	Predicted RBP	11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	SSTR5	P35346	364 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	UBE2NL	Q5JXB2	153 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	RTN4RL2	Q86UN3	420 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	BCL6B	Q8N143	479 aa	Predicted RBP	11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	GAPT	Q8N292	157 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	ABHD12	Q8N2K0	398 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	PRR18	Q8N4B5	295 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	OR10A7	Q8NGE5	316 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	UBALD1	Q8TB05	177 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	ZNF418	Q8TF45	676 aa	Predicted RBP	11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	ZDHHC16	Q969W1	377 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	CYYR1	Q96J86	154 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	SLC6A7	Q99884	636 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	CLEC7A	Q9BXN2	247 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	DSCAML1	Q8TD84	2053 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	TENM1	Q9UKZ4	2725 aa		11.29	□□□□□ -0.6
SCAP-211	ENST00000485967	TRAV18	A0A075B6X5	111 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967		A0A0A6YYH2	397 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967		A6NJ64	397 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	SERPINE3	A8MV23	424 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967		H3BMQ9	156 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	TOR1A	O14656	332 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms