RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SEC22AQ96IW7 307 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 CABLES2Q9BTV7 478 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 RNF7Q9UBF6 113 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.05■■□□□ 1.12
SHOX2-204ENST00000483851 HERV-K104P61576 105 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 BAMBIQ13145 260 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 TESK1Q15569 626 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 C4orf17Q53FE4 359 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 SLC38A6Q8IZM9 456 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 SCARB1Q8WTV0 552 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 CASTOR1Q8WTX7 329 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 PPP1R1CQ8WVI7 109 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 GCM1Q9NP62 436 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 TMEM30CPA0ZSE6 113 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 NPIPB11E5RHQ5 1161 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 PSPNO60542 156 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 AGAP20933 346 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 SUPT4H1P63272 117 aaKnown RBP22.04■■□□□ 1.12
SHOX2-204ENST00000483851 ZNF345Q14585 488 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 EFNB3Q15768 340 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 COMMD7Q86VX2 200 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 KCNRGQ8N5I3 272 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 OR11L1Q8NGX0 322 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 LILRB1Q8NHL6 650 aaPredicted RBP22.04■■□□□ 1.12
SHOX2-204ENST00000483851 TRAPPC2LQ9UL33 140 aa22.04■■□□□ 1.12
SHOX2-204ENST00000483851 ITPR1Q14643 2758 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 A0A0D9SG52 128 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 TUSC2O75896 110 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 PPYP01298 95 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 APOBEC3AP31941 199 aaPredicted RBP22.03■■□□□ 1.12
SHOX2-204ENST00000483851 PRDX2P32119 198 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 SLC51BQ86UW2 128 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 LINC01560Q8TB33 94 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 PDCD10Q9BUL8 212 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 DNAJB11Q9UBS4 358 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 RNF115Q9Y4L5 304 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 E7EQL1 145 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 PSG2P11465 335 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 RPS2P15880 293 aaKnown RBP22.03■■□□□ 1.12
SHOX2-204ENST00000483851 EGR1P18146 543 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 TFF3Q07654 80 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 HERPUD1Q15011 391 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 PPP1R35Q8TAP8 253 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 FAM222BQ8WU58 562 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 COMMD9Q9P000 198 aa22.03■■□□□ 1.12
SHOX2-204ENST00000483851 TRBV6-7A0A0A0MS04 114 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 RCC1P18754 421 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-204ENST00000483851 CEBPDP49716 269 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-204ENST00000483851 TLE1Q04724 770 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 ATXN7L3Q14CW9 347 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-204ENST00000483851 SPRNQ5BIV9 151 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 CLEC18BQ6UXF7 455 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 KCTD9Q7L273 389 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 COQ8AQ8NI60 647 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 EGLN1Q9GZT9 426 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 MED9Q9NWA0 146 aa22.02■■□□□ 1.12
SHOX2-204ENST00000483851 TPRP12270 2363 aaKnown RBP22.01■■□□□ 1.11
SHOX2-204ENST00000483851 OR2F2O95006 317 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 NMBP08949 121 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 PI3P19957 117 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 AADACP22760 399 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 COL10A1Q03692 680 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 OR2F1Q13607 317 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 TOR2AQ5JU69 321 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 SGPP2Q8IWX5 399 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 RSRP1Q9BUV0 290 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 MS4A5Q9H3V2 200 aa22.01■■□□□ 1.11
SHOX2-204ENST00000483851 IGKV1-6A0A0C4DH72 117 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 RNF222A6NCQ9 220 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 GRNP28799 593 aaKnown RBP22■■□□□ 1.11
SHOX2-204ENST00000483851 OR3A1P47881 315 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 CDSNQ15517 529 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 HMGN3Q15651 99 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 FAM185AQ8N0U4 392 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 OR5T2Q8NGG2 359 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 TOMM40LQ969M1 308 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 PPP1R3CQ9UQK1 317 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 CRYM-AS1A6NIL9 109 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 B9A039 149 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 BET1O15155 118 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 IRF2P14316 349 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 ABCA11PQ4W5N1 156 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 CD177Q8N6Q3 437 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 OR10J5Q8NHC4 309 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 SNX22Q96L94 193 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 NMES1Q9C002 83 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 RAB18Q9NP72 206 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 KCNIP1Q9NZI2 227 aa22■■□□□ 1.11
SHOX2-204ENST00000483851 IGKV1D-17A0A075B6S4 117 aa21.99■■□□□ 1.11
SHOX2-204ENST00000483851 ZNF737O75373 536 aa21.99■■□□□ 1.11
SHOX2-204ENST00000483851 FXYD4P59646 89 aa21.99■■□□□ 1.11
SHOX2-204ENST00000483851 AANATQ16613 207 aa21.99■■□□□ 1.11
SHOX2-204ENST00000483851 ALKAL2Q6UX46 152 aa21.99■■□□□ 1.11
SHOX2-204ENST00000483851 CCDC71LQ8N9Z2 235 aa21.99■■□□□ 1.11
SHOX2-204ENST00000483851 COL6A6A6NMZ7 2263 aa21.99■■□□□ 1.11
SHOX2-204ENST00000483851 AP2S1P53680 142 aaPredicted RBP21.98■■□□□ 1.11
SHOX2-204ENST00000483851 TRAT1Q6PIZ9 186 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 ACOT7LQ6ZUV0 252 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 GALNT14Q96FL9 552 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 REG4Q9BYZ8 158 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms