RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 COL11A1P12107 1806 aaPredicted RBP2.21□□□□□ -2.05
PMS1-219ENST00000483293 TRGV4A0A0C4DH28 118 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 FGF16O43320 207 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 IFI30P13284 250 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 GTF2H1P32780 548 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 MP68P56378 58 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 CRB1P82279 1406 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 CEP170Q5SW79 1584 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 SPNS3Q6ZMD2 512 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 ST13P4Q8IZP2 240 aaPredicted RBP2.21□□□□□ -2.06
PMS1-219ENST00000483293 Q8NDZ9 215 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 FAAP24Q9BTP7 215 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 STK38LQ9Y2H1 464 aa2.21□□□□□ -2.06
PMS1-219ENST00000483293 OTOGLQ3ZCN5 2332 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 C17orf98A8MV24 154 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 C8orf87E5RJ46 101 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 J3QKU1 62 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 K7EQS6 105 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 TOR1AO14656 332 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 IGKV1-16P04430 117 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 CD164Q04900 197 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 MSANTD3Q96H12 275 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 EBPLQ9BY08 206 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 ZNF286AQ9HBT8 521 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 ENPP5Q9UJA9 477 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 SNX24Q9Y343 169 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 ARAP3Q8WWN8 1544 aa2.2□□□□□ -2.06
PMS1-219ENST00000483293 CCL2P13500 99 aa2.19□□□□□ -2.06
PMS1-219ENST00000483293 BSXQ3C1V8 233 aa2.19□□□□□ -2.06
PMS1-219ENST00000483293 Q6ZRU5 148 aa2.19□□□□□ -2.06
PMS1-219ENST00000483293 LRRC6Q86X45 466 aa2.19□□□□□ -2.06
PMS1-219ENST00000483293 NIT1Q86X76 327 aa2.19□□□□□ -2.06
PMS1-219ENST00000483293 AGPAT3Q9NRZ7 376 aa2.19□□□□□ -2.06
PMS1-219ENST00000483293 MRM2Q9UI43 246 aaKnown RBP2.19□□□□□ -2.06
PMS1-219ENST00000483293 VPREB3Q9UKI3 123 aa2.19□□□□□ -2.06
PMS1-219ENST00000483293 COL5A3P25940 1745 aaPredicted RBP2.19□□□□□ -2.06
PMS1-219ENST00000483293 ABCB11O95342 1321 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 DNMT1P26358 1616 aaKnown RBP2.18□□□□□ -2.06
PMS1-219ENST00000483293 IGKV1-12A0A0C4DH73 117 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 IGSF23A1L1A6 192 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 POLR3GO15318 223 aaPredicted RBP2.18□□□□□ -2.06
PMS1-219ENST00000483293 FABP7O15540 132 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 CDK14O94921 469 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 SNAP29O95721 258 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 LDOC1O95751 146 aaPredicted RBP2.18□□□□□ -2.06
PMS1-219ENST00000483293 IGKV1D-12P01611 117 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 S100A9P06702 114 aaKnown RBP2.18□□□□□ -2.06
PMS1-219ENST00000483293 DEFB103AP81534 67 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 STX3Q13277 289 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 OR10J3Q5JRS4 329 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 OR2Y1Q8NGV0 311 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 DDIT4LQ96D03 193 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 MRAP2Q96G30 205 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 AICDAQ9GZX7 198 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 GOLPH3Q9H4A6 298 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 TMEM106BQ9NUM4 274 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 POFUT2Q9Y2G5 429 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 OR51B4Q9Y5P0 310 aa2.18□□□□□ -2.06
PMS1-219ENST00000483293 MYO15BQ96JP2 1530 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 MYO5BQ9ULV0 1848 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 A8MWP6 167 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 PLPP3O14495 311 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 SOX14O95416 240 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 CST4P01036 141 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 CPMP14384 443 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 AKR1C4P17516 323 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 HES3Q5TGS1 186 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 OR10P1Q8NGE3 313 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 ZNRF2Q8NHG8 242 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 TMEM239Q8WW34 195 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 ZNF75CPQ92670 426 aaPredicted RBP2.17□□□□□ -2.06
PMS1-219ENST00000483293 PRSS27Q9BQR3 290 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 MAT2BQ9NZL9 334 aa2.17□□□□□ -2.06
PMS1-219ENST00000483293 VPS37CA5D8V6 355 aaPredicted RBP2.16□□□□□ -2.06
PMS1-219ENST00000483293 TMEM250H0YL14 139 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 RAB36O95755 333 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 CRYGDP07320 174 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 TPM1P09493 284 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 INPP1P49441 399 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 SULT1A2P50226 295 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 OR10A3P58181 314 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 FLOT2Q14254 428 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 OR8G1Q15617 311 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 DNAAF3Q8N9W5 541 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 SUN5Q8TC36 379 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 FAM45AQ8TCE6 357 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 WASHC3Q9Y3C0 194 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 ARHGAP32A7KAX9 2087 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 MUC6Q6W4X9 2439 aa2.16□□□□□ -2.06
PMS1-219ENST00000483293 ATAD5Q96QE3 1844 aa2.15□□□□□ -2.06
PMS1-219ENST00000483293 LOC100506127A0A0U1RQW1 187 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 LOC102725191A0A1B0GVB3 256 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 B4DEV8 164 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 F8VP50 259 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 J3QLI3 93 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 TNFAIP8O95379 198 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 LTAP01374 205 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 PSMA1P25786 263 aaKnown RBP2.15□□□□□ -2.07
PMS1-219ENST00000483293 ACTR1BP42025 376 aa2.15□□□□□ -2.07
PMS1-219ENST00000483293 GABARAPL2P60520 117 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms