RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 JMJD8Q96S16 334 aa8.36□□□□□ -1.07
HDAC6-222ENST00000478095 SULT4A1Q9BR01 284 aa8.36□□□□□ -1.07
HDAC6-222ENST00000478095 TM2D1Q9BX74 207 aa8.36□□□□□ -1.07
HDAC6-222ENST00000478095 LIN7BQ9HAP6 207 aa8.36□□□□□ -1.07
HDAC6-222ENST00000478095 TAS2R3Q9NYW6 316 aa8.36□□□□□ -1.07
HDAC6-222ENST00000478095 CALYQ9NYX4 217 aa8.36□□□□□ -1.07
HDAC6-222ENST00000478095 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 IGHV2-26A0A0B4J1V2 119 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 KBTBD11-OT1A0A1B0GTJ5 212 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 ZNF729A6NN14 1252 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-222ENST00000478095 NOTOA8MTQ0 251 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 SOCS1O15524 211 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 AIREO43918 545 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 PAHP00439 452 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 IL1AP01583 271 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 IGHV3-7P01780 117 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 IGHV4-59P01825 116 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 MT-ND4P03905 459 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 FBP1P09467 338 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 JUNBP17275 347 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-222ENST00000478095 BLVRBP30043 206 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-222ENST00000478095 EFNB2P52799 333 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 PAX5Q02548 391 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 SLC9A3R2Q15599 337 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 TIMM50Q3ZCQ8 353 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 MIDNQ504T8 468 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 HEPN1Q6WQI6 88 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 Q6YL49 198 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-222ENST00000478095 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 LEAP2Q969E1 77 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 KIRREL1Q96J84 757 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 URM1Q9BTM9 101 aaKnown RBP8.35□□□□□ -1.07
HDAC6-222ENST00000478095 FAAP24Q9BTP7 215 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 C19orf24Q9BVV8 132 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 TMEM133Q9H2Q1 129 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 DAPK2Q9UIK4 370 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 TRAPPC2LQ9UL33 140 aa8.35□□□□□ -1.07
HDAC6-222ENST00000478095 FBN1P35555 2871 aaKnown RBP8.34□□□□□ -1.07
HDAC6-222ENST00000478095 ODF3BA8MYP8 253 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 TRIM77I1YAP6 450 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 LDLRAD4O15165 306 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 CGB3P0DN86 165 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 CGB7P0DN87 165 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 CFPP27918 469 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 VEGFCP49767 419 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 LGALS4P56470 323 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 PLA1AQ53H76 456 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 LDLRAD2Q5SZI1 272 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 ZNF626Q68DY1 528 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 FAM53AQ6NSI3 398 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-222ENST00000478095 SFXN4Q6P4A7 337 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 TPRA1Q86W33 373 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 ABHD12Q8N2K0 398 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 PRR18Q8N4B5 295 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 OR11H6Q8NGC7 330 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 OR13F1Q8NGS4 319 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 TAF15Q92804 592 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC6-222ENST00000478095 ARL11Q969Q4 196 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 AJUBAQ96IF1 538 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 FUNDC2Q9BWH2 189 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 PRDM13Q9H4Q3 707 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 NCOR1P1Q9H4R4 102 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 ZNF286AQ9HBT8 521 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 PLEKHJ1Q9NW61 149 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 IDI2-AS1Q9NZ38 188 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 ZNRD1Q9P1U0 126 aa8.34□□□□□ -1.07
HDAC6-222ENST00000478095 FOXI3A8MTJ6 420 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-222ENST00000478095 C12orf77C9JDV5 145 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 GLAP06280 429 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 RCC1P18754 421 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-222ENST00000478095 IER3P46695 156 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 GNG10P50151 68 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 ACTG1P63261 375 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 ATRQ13535 2644 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 MOGAT2Q3SYC2 334 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 OR52W1Q6IF63 320 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 GDPGP1Q6ZNW5 385 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 C5orf24Q7Z6I8 188 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 LDLRAD3Q86YD5 345 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 DYNAPQ8N1N2 210 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 NDNFQ8TB73 568 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 MRPL30Q8TCC3 161 aaKnown RBP8.33□□□□□ -1.08
HDAC6-222ENST00000478095 SSMEM1Q8WWF3 244 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 ARHGAP5-AS1Q96IT6 56 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 HDHD3Q9BSH5 251 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-222ENST00000478095 CLEC7AQ9BXN2 247 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 MRPS26Q9BYN8 205 aaKnown RBP8.33□□□□□ -1.08
HDAC6-222ENST00000478095 CHIAQ9BZP6 476 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 CHMP1AQ9HD42 196 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-222ENST00000478095 FBLN5Q9UBX5 448 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 RAB22AQ9UL26 194 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 DOCK11Q5JSL3 2073 aa8.33□□□□□ -1.08
HDAC6-222ENST00000478095 A0A075B6Q4 140 aa8.32□□□□□ -1.08
HDAC6-222ENST00000478095 IGHV3-43A0A0B4J1X8 118 aa8.32□□□□□ -1.08
HDAC6-222ENST00000478095 NPIPB11E5RHQ5 1161 aa8.32□□□□□ -1.08
HDAC6-222ENST00000478095 H3BUI4 141 aa8.32□□□□□ -1.08
HDAC6-222ENST00000478095 SDCBPO00560 298 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-222ENST00000478095 TOR1AO14656 332 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms