RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 C9J4A7 227 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 F8VZ95 297 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 UGT2B11O75310 529 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 ZNF708P17019 499 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 AKR1C4P17516 323 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 PSMB6P28072 239 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 RAB8AP61006 207 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 DYNLL1P63167 89 aaKnown RBP2.86□□□□□ -1.95
VPS50-212ENST00000476413 ZNHIT3Q15649 155 aaPredicted RBP2.86□□□□□ -1.95
VPS50-212ENST00000476413 SPIN3Q5JUX0 258 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 CRLF3Q8IUI8 442 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 Q8NAQ8 132 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 BPIFB6Q8NFQ5 453 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 OR11L1Q8NGX0 322 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 LRRC45Q96CN5 670 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 PKMYT1Q99640 499 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 EURLQ9NYK6 297 aa2.86□□□□□ -1.95
VPS50-212ENST00000476413 TMEM213A2RRL7 107 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 PSIP1O75475 530 aaKnown RBP2.85□□□□□ -1.95
VPS50-212ENST00000476413 RAB36O95755 333 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 GPR75O95800 540 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 LTAP01374 205 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 INPP1P49441 399 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 SKP2Q13309 424 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 BCL2A1Q16548 175 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 XKRXQ6PP77 449 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 EIF4E3Q8N5X7 224 aaKnown RBP2.85□□□□□ -1.95
VPS50-212ENST00000476413 OR5AK3PQ8NH89 298 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 IGF2BP2-AS1Q96M15 143 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 TRIB3Q96RU7 358 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 ZNF251Q9BRH9 671 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 ABCG5Q9H222 651 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 DMAC2Q9NW81 257 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 COMMD9Q9P000 198 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 SPATA31E1Q6ZUB1 1445 aa2.85□□□□□ -1.95
VPS50-212ENST00000476413 NACADO15069 1562 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 EIF4G1Q04637 1599 aaKnown RBP2.84□□□□□ -1.95
VPS50-212ENST00000476413 A0A1B0GU33 70 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 D6RAR5 112 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 TOR1AO14656 332 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 PHYHO14832 338 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 ATF1P18846 271 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 HSPA13P48723 471 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 DLX6P56179 175 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 PAFAH1B3Q15102 231 aaKnown RBP2.84□□□□□ -1.95
VPS50-212ENST00000476413 TAF9Q16594 264 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 LGALSLQ3ZCW2 172 aaPredicted RBP2.84□□□□□ -1.95
VPS50-212ENST00000476413 PDPK2PQ6A1A2 396 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 BRD3OSQ6XYD6 125 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 MTERF4Q7Z6M4 381 aaKnown RBP2.84□□□□□ -1.95
VPS50-212ENST00000476413 FER1L6-AS1Q8NA97 138 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 OR9I1Q8NGQ6 314 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 MUC7Q8TAX7 377 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 DTD1Q8TEA8 209 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 NAGKQ9UJ70 344 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 LINC00588Q9Y4M8 146 aa2.84□□□□□ -1.95
VPS50-212ENST00000476413 IGHV3OR15-7A0A075B7D8 119 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 IGKV1-12A0A0C4DH73 117 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 F5H5K5 113 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 TOX3O15405 576 aaPredicted RBP2.83□□□□□ -1.96
VPS50-212ENST00000476413 AQP9O43315 295 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 CALUO43852 315 aaPredicted RBP2.83□□□□□ -1.96
VPS50-212ENST00000476413 IGKV1D-12P01611 117 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 PYDC2Q56P42 97 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 LYZL2Q7Z4W2 148 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 VN1R4Q7Z5H5 301 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 LY6G5BQ8NDX9 201 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 OR11G2Q8NGC1 345 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 OR4P4Q8NGL7 312 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 UGT2B28Q9BY64 529 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 NDEL1Q9GZM8 345 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 RPUSD1Q9UJJ7 312 aaKnown RBP2.83□□□□□ -1.96
VPS50-212ENST00000476413 PHLDA3Q9Y5J5 127 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 OR51B4Q9Y5P0 310 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 MYO5BQ9ULV0 1848 aa2.83□□□□□ -1.96
VPS50-212ENST00000476413 IGKV3D-11A0A0A0MRZ8 115 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 LECT2O14960 151 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 IGKV4-1P06312 121 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 LGALS3P17931 250 aaKnown RBP2.82□□□□□ -1.96
VPS50-212ENST00000476413 CRABP2P29373 138 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 CRATP43155 626 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 TCF23Q7RTU1 214 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 LRP11Q86VZ4 500 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 SPATA24Q86W54 205 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 BLIDQ8IZY5 108 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 OTUD6BQ8N6M0 293 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 OR5D18Q8NGL1 313 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 ZNRF2Q8NHG8 242 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 PPWD1Q96BP3 646 aaKnown RBP2.82□□□□□ -1.96
VPS50-212ENST00000476413 SLC25A44Q96H78 314 aaPredicted RBP2.82□□□□□ -1.96
VPS50-212ENST00000476413 POTEKPQ9BYX7 375 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 CHST5Q9GZS9 411 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 WDR54Q9H977 334 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 ZNF286AQ9HBT8 521 aa2.82□□□□□ -1.96
VPS50-212ENST00000476413 SDK2Q58EX2 2172 aa2.81□□□□□ -1.96
VPS50-212ENST00000476413 TRBV24-1A0A075B6N3 115 aa2.81□□□□□ -1.96
VPS50-212ENST00000476413 ARGFXA6NJG6 315 aa2.81□□□□□ -1.96
VPS50-212ENST00000476413 CYTH3O43739 400 aa2.81□□□□□ -1.96
VPS50-212ENST00000476413 SH2D1AO60880 128 aa2.81□□□□□ -1.96
VPS50-212ENST00000476413 ASS1P00966 412 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms