RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 FAM209AQ5JX71 171 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 C20orf204Q6ZNR8 217 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 SGPP2Q8IWX5 399 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 DMRTC2Q8IXT2 367 aaPredicted RBP8.58□□□□□ -1.04
PCCB-213ENST00000475214 SLC38A6Q8IZM9 456 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 GCSAMQ8N6F7 178 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 ZNF565Q8N9K5 539 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 Q8TCH9 128 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 ITLN2Q8WWU7 325 aaPredicted RBP8.58□□□□□ -1.04
PCCB-213ENST00000475214 TMEM230Q96A57 120 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 MOB3AQ96BX8 217 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 PIK3IP1Q96FE7 263 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 OR2A7Q96R45 310 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 FXYD6Q9H0Q3 95 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 MS4A5Q9H3V2 200 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 GCM1Q9NP62 436 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 DYNLRB1Q9NP97 96 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 SLC23A1Q9UHI7 598 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 SHPKQ9UHJ6 478 aa8.58□□□□□ -1.04
PCCB-213ENST00000475214 CHD3Q12873 2000 aaKnown RBP8.58□□□□□ -1.04
PCCB-213ENST00000475214 CACNA1DQ01668 2161 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 LRRC30A6NM36 301 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 B9A039 149 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 PSPNO60542 156 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 SNAPC5O75971 98 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 RGS11O94810 467 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 CLDN14O95500 239 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 IFNA2P01563 188 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 COX6B1P14854 86 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 HLA-GP17693 338 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 RCC1P18754 421 aaPredicted RBP8.57□□□□□ -1.04
PCCB-213ENST00000475214 NFYAP23511 347 aaPredicted RBP8.57□□□□□ -1.04
PCCB-213ENST00000475214 GRNP28799 593 aaKnown RBP8.57□□□□□ -1.04
PCCB-213ENST00000475214 GABRA2P47869 451 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 CDSNQ15517 529 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 SLC9A3R2Q15599 337 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 EFNB3Q15768 340 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 SPRNQ5BIV9 151 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 KCTD9Q7L273 389 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 ASCC1Q8N9N2 400 aaKnown RBP8.57□□□□□ -1.04
PCCB-213ENST00000475214 CCDC71LQ8N9Z2 235 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 OR2T35Q8NGX2 323 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 OR10J5Q8NHC4 309 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 LILRB1Q8NHL6 650 aaPredicted RBP8.57□□□□□ -1.04
PCCB-213ENST00000475214 SNX22Q96L94 193 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 CABLES2Q9BTV7 478 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 RSRP1Q9BUV0 290 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 LIME1Q9H400 295 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 MBNL3Q9NUK0 354 aaKnown RBP8.57□□□□□ -1.04
PCCB-213ENST00000475214 CISD1Q9NZ45 108 aaKnown RBP8.57□□□□□ -1.04
PCCB-213ENST00000475214 PPP1R3CQ9UQK1 317 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 KCNIP3Q9Y2W7 256 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 CRYBG3Q68DQ2 2970 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
PCCB-213ENST00000475214 DIDO1Q9BTC0 2240 aaKnown RBP8.56□□□□□ -1.04
PCCB-213ENST00000475214 IGKV1D-17A0A075B6S4 117 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 IGHV3OR15-7A0A075B7D8 119 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 TRBV6-7A0A0A0MS04 114 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 OOEPA6NGQ2 149 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 CRYM-AS1A6NIL9 109 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.56□□□□□ -1.04
PCCB-213ENST00000475214 SIX6O95475 246 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 CD80P33681 288 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 RBMXP38159 391 aaKnown RBP8.56□□□□□ -1.04
PCCB-213ENST00000475214 OR3A1P47881 315 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 PIGPP57054 158 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 CCL8P80075 99 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 AESQ08117 197 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 HERPUD1Q15011 391 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 C2orf68Q2NKX9 166 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 KRBOX4Q5JUW0 171 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 C6orf183Q5T699 404 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 TRAT1Q6PIZ9 186 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 FAM185AQ8N0U4 392 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 C1orf87Q8N0U7 546 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 CD177Q8N6Q3 437 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 OR5M8Q8NGP6 311 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 FAM222BQ8WU58 562 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 NEUROG1Q92886 237 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 KIRREL1Q96J84 757 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 PDCD10Q9BUL8 212 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 SAP30LQ9HAJ7 183 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 TAF9BQ9HBM6 251 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 PIPOXQ9P0Z9 390 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 KIF25Q9UIL4 384 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 CADP27708 2225 aa8.56□□□□□ -1.04
PCCB-213ENST00000475214 IGKV1-6A0A0C4DH72 117 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 NPIPB11E5RHQ5 1161 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 MGST3O14880 152 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 HSPA12AO43301 675 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 TUSC2O75896 110 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 ZNF205O95201 554 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 CYB5R3P00387 301 aaPredicted RBP8.55□□□□□ -1.04
PCCB-213ENST00000475214 MUC1P15941 1255 aaPredicted RBP8.55□□□□□ -1.04
PCCB-213ENST00000475214 S100GP29377 79 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 H2BFSP57053 126 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 SUPT4H1P63272 117 aaKnown RBP8.55□□□□□ -1.04
PCCB-213ENST00000475214 HOXA4Q00056 320 aaPredicted RBP8.55□□□□□ -1.04
PCCB-213ENST00000475214 PAX5Q02548 391 aa8.55□□□□□ -1.04
PCCB-213ENST00000475214 TFF3Q07654 80 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms