RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 OR9G1Q8NH87 305 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 ARL11Q969Q4 196 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 MRPS24Q96EL2 167 aaKnown RBP12.88□□□□□ -0.35
ITGB1-210ENST00000474568 GFI1Q99684 422 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 NPFFR1Q9GZQ6 430 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 CST11Q9H112 138 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 Q9H521 79 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 SPACA1Q9HBV2 294 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 RCC2Q9P258 522 aaKnown RBP12.88□□□□□ -0.35
ITGB1-210ENST00000474568 TRAPPC2LQ9UL33 140 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 PSG11Q9UQ72 335 aa12.88□□□□□ -0.35
ITGB1-210ENST00000474568 A0A087X0M5 115 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 A0A1B0GX30 115 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 NPIPB11E5RHQ5 1161 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 BUB1B-PAK6H3BSN5 160 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
ITGB1-210ENST00000474568 HTR2CP28335 458 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 PAX5Q02548 391 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 HABP2Q14520 560 aaPredicted RBP12.87□□□□□ -0.35
ITGB1-210ENST00000474568 TRAM1Q15629 374 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 SSX1Q16384 188 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 FBLN7Q53RD9 439 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 C1orf100Q5SVJ3 147 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 LIAT1Q6ZQX7 453 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 PRR18Q8N4B5 295 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 MMP28Q9H239 520 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 PLGRKTQ9HBL7 147 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 GHRLQ9UBU3 117 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 PITPNC1Q9UKF7 332 aa12.87□□□□□ -0.35
ITGB1-210ENST00000474568 RRP15Q9Y3B9 282 aaKnown RBP12.87□□□□□ -0.35
ITGB1-210ENST00000474568 J3QR06 171 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 PDCD6O75340 191 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 UBBP0CG47 229 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 FUT3P21217 361 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
ITGB1-210ENST00000474568 DYNLT3P51808 116 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 EMX1Q04741 257 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-210ENST00000474568 SYT6Q5T7P8 510 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-210ENST00000474568 C5orf24Q7Z6I8 188 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 CITED1Q99966 193 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 NICN1Q9BSH3 213 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 TMEM59Q9BXS4 323 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 TRRAPQ9Y4A5 3859 aa12.86□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A10PA6NDY2 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A18PA6NE21 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A16PA6NEW6 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A20PA6NIJ5 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A7PA6NKC0 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A22PA8MWA6 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A12PA8MX19 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A5PA8MXJ8 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A23PA8MXZ1 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 C15orf65H3BRN8 121 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 SDCBPO00560 298 aaPredicted RBP12.85□□□□□ -0.35
ITGB1-210ENST00000474568 SLC22A1O15245 554 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 DENRO43583 198 aaKnown RBP12.85□□□□□ -0.35
ITGB1-210ENST00000474568 ARL6IP5O75915 188 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A15PP0C7V4 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A13PP0C7W8 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A14PP0C7W9 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FAM90A24PP0C7X0 464 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 GZMHP20718 246 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 BRS3P32247 399 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 CEACAM3P40198 252 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 CLDN12P56749 244 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 GABARAPL2P60520 117 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 RPS27AP62979 156 aaKnown RBP12.85□□□□□ -0.35
ITGB1-210ENST00000474568 UNC119Q13432 240 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 DIAPH2-AS1Q14236 149 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 C11orf44Q8N8P7 122 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 OR6M1Q8NGM8 313 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 OR1L1Q8NH94 360 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 OR2T6Q8NHC8 308 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 TOMM40LQ969M1 308 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 RPEQ96AT9 228 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 NEDD4LQ96PU5 975 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 RANBP3Q9H6Z4 567 aaPredicted RBP12.85□□□□□ -0.35
ITGB1-210ENST00000474568 LINC00574Q9H8X3 128 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 ZNF702PQ9H963 129 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 FBLN5Q9UBX5 448 aa12.85□□□□□ -0.35
ITGB1-210ENST00000474568 C12orf77C9JDV5 145 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 LY6LH3BQJ8 138 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 VSIG10L2P0DP72 767 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
ITGB1-210ENST00000474568 PSMB9P28065 219 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 KIR2DS4P43632 304 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 EFNB2P52799 333 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 RAB11BQ15907 218 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 ARSJQ5FYB0 599 aaPredicted RBP12.84□□□□□ -0.35
ITGB1-210ENST00000474568 Q6ZS46 218 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 SVOPQ8N4V2 548 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 KLHDC1Q8N7A1 406 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 OR10A7Q8NGE5 316 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 OR10V1Q8NGI7 309 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 OR10X1Q8NGY0 326 aa12.84□□□□□ -0.35
ITGB1-210ENST00000474568 CAPSLQ8WWF8 208 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms