RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 OR5R1Q8NH85 324 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 RFESDQ8TAC1 157 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 CREB3L1Q96BA8 519 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 MALSU1Q96EH3 234 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 KCNK15Q9H427 330 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 CHMP1AQ9HD42 196 aaPredicted RBP11.19□□□□□ -0.62
USF1-205ENST00000473969 ABCB10Q9NRK6 738 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 ZNRD1Q9P1U0 126 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 ATRQ13535 2644 aa11.19□□□□□ -0.62
USF1-205ENST00000473969 TRAV39A0A0B4J263 110 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 NOTOA8MTQ0 251 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 SPINT2O43291 252 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 ORC5O43913 435 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 MMP23AO75900 390 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 HTR1DP28221 377 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 ARHGDIBP52566 201 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 QRFPP83859 136 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 C17orf58Q2M2W7 97 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 SIGIRRQ6IA17 410 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 SSX3Q99909 188 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 NICN1Q9BSH3 213 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 LPAR5Q9H1C0 372 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 MEGF9Q9H1U4 602 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 LIN7BQ9HAP6 207 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 FBLN5Q9UBX5 448 aa11.18□□□□□ -0.62
USF1-205ENST00000473969 SHISA3A0PJX4 238 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 SMIM30A4D0T7 59 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 FAM172BPA6NC97 362 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 METTL21EPA6NDL7 271 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 ODF3BA8MYP8 253 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 AIREO43918 545 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 IGHV4-59P01825 116 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 CGB3P0DN86 165 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 CGB7P0DN87 165 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 JUNBP17275 347 aaPredicted RBP11.17□□□□□ -0.62
USF1-205ENST00000473969 CHATP28329 748 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 CD34P28906 385 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 SDC2P34741 201 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 SSTR5P35346 364 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 CEACAM3P40198 252 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 VEGFCP49767 419 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 MRPS15P82914 257 aaKnown RBP11.17□□□□□ -0.62
USF1-205ENST00000473969 MXD1Q05195 221 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 SSX2Q16385 188 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 LRRC75BQ2VPJ9 315 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 C12orf54Q6X4T0 127 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 Q6ZTK2 550 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 C6orf201Q7Z4U5 140 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 LHFPL4Q7Z7J7 247 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 OR9G1Q8NH87 305 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 DYRK2Q92630 601 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 KIRREL1Q96J84 757 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 FAAP24Q9BTP7 215 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 CHIAQ9BZP6 476 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 RIMS4Q9H426 269 aaPredicted RBP11.17□□□□□ -0.62
USF1-205ENST00000473969 DPM3Q9P2X0 92 aa11.17□□□□□ -0.62
USF1-205ENST00000473969 AMMECR1Q9Y4X0 333 aaPredicted RBP11.17□□□□□ -0.62
USF1-205ENST00000473969 CUBNO60494 3623 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 TMEM272A0A1B0GTI8 110 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 LEUTXA8MZ59 168 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 NPIPB11E5RHQ5 1161 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 SDCBPO00560 298 aaPredicted RBP11.16□□□□□ -0.62
USF1-205ENST00000473969 SOCS1O15524 211 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 RAB6AP20340 208 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 GDNFP39905 211 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 FOXL1Q12952 345 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 AANATQ16613 207 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 TMEM30BQ3MIR4 351 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 PRR18Q8N4B5 295 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 FAM89BQ8N5H3 189 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 SETD6Q8TBK2 473 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 C17orf50Q8WW18 174 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 LINC00574Q9H8X3 128 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 ZNF286AQ9HBT8 521 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 DAPK2Q9UIK4 370 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 HILPDAQ9Y5L2 63 aa11.16□□□□□ -0.62
USF1-205ENST00000473969 A0A087X0M5 115 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 A0A1B0GX30 115 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 H3BUX3 64 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 HKR1P10072 659 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 SLC2A2P11168 524 aaPredicted RBP11.15□□□□□ -0.62
USF1-205ENST00000473969 CFPP27918 469 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 RPL15P61313 204 aaKnown RBP11.15□□□□□ -0.62
USF1-205ENST00000473969 PLA1AQ53H76 456 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 SFXN4Q6P4A7 337 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 BAIAP2L2Q6UXY1 529 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 OR52M1Q8NGK5 317 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 OR10X1Q8NGY0 326 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 PHF21AQ96BD5 680 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 YIPF6Q96EC8 236 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 CENPOQ9BU64 300 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 MRPS26Q9BYN8 205 aaKnown RBP11.15□□□□□ -0.62
USF1-205ENST00000473969 RAB18Q9NP72 206 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 ABRACLQ9P1F3 81 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms