RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PSMB9P28065 219 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 RPS27AP62979 156 aaKnown RBP15.28■□□□□ 0.04
PTCD3-210ENST00000473829 DHRS7BQ6IAN0 325 aaPredicted RBP15.28■□□□□ 0.04
PTCD3-210ENST00000473829 Q6ZSV7 163 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 RTN4RL2Q86UN3 420 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 UBALD1Q8TB05 177 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 NDNFQ8TB73 568 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 NICN1Q9BSH3 213 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 TMEM59Q9BXS4 323 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 IDI2-AS1Q9NZ38 188 aa15.28■□□□□ 0.04
PTCD3-210ENST00000473829 A0A0A6YYD4 124 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 MCRIP1C9JLW8 97 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 C15orf65H3BRN8 121 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 AIPO00170 330 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 CCRL2O00421 344 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 CHST1O43916 411 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 PDCD6O75340 191 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 BPNT1O95861 308 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 FUT3P21217 361 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 HTR1DP28221 377 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 CLDN12P56749 244 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 HLA-DRB5Q30154 266 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 GAPTQ8N292 157 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 OR4F5Q8NH21 305 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 FCGR1BQ92637 280 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 ZNF747Q9BV97 191 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 PLGRKTQ9HBL7 147 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 ETAA1Q9NY74 926 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 MMP24Q9Y5R2 645 aa15.27■□□□□ 0.04
PTCD3-210ENST00000473829 TRDV1A0A1B0GX56 115 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 UBE2QL1A1L167 161 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 CHATP28329 748 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 OR10A3P58181 314 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 RBM39Q14498 530 aaKnown RBP15.26■□□□□ 0.03
PTCD3-210ENST00000473829 KCTD21Q4G0X4 260 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 NKAPLQ5M9Q1 402 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 FAM53AQ6NSI3 398 aaPredicted RBP15.26■□□□□ 0.03
PTCD3-210ENST00000473829 CCBE1Q6UXH8 406 aaPredicted RBP15.26■□□□□ 0.03
PTCD3-210ENST00000473829 OR4K15Q8NH41 348 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 KCNG3Q8TAE7 436 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 ZNF596Q8TC21 504 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 TM2D1Q9BX74 207 aa15.26■□□□□ 0.03
PTCD3-210ENST00000473829 RAB11BQ15907 218 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 C22orf42Q6IC83 251 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 OR9G1Q8NH87 305 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 LINC01006Q8NI28 216 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 ARL11Q969Q4 196 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 SULT4A1Q9BR01 284 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 LPAR5Q9H1C0 372 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 BEX1Q9HBH7 125 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 DPM3Q9P2X0 92 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 PSG11Q9UQ72 335 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 TCF19Q9Y242 345 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 V9GY05 133 aa15.25■□□□□ 0.03
PTCD3-210ENST00000473829 TRAV1-2A0A0B4J238 106 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 CLPSL1A2RUU4 121 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 A6NDX4 124 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 C12orf77C9JDV5 145 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 LY6LH3BQJ8 138 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 BUB1B-PAK6H3BSN5 160 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 GLAP06280 429 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 ARSBP15848 533 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 RCC1P18754 421 aaPredicted RBP15.24■□□□□ 0.03
PTCD3-210ENST00000473829 GZMHP20718 246 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 GNG10P50151 68 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 DYNLT3P51808 116 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 PLA2G7Q13093 441 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 FBLN7Q53RD9 439 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 SYT6Q5T7P8 510 aaPredicted RBP15.24■□□□□ 0.03
PTCD3-210ENST00000473829 HES5Q5TA89 166 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 OLFML2AQ68BL7 652 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 C6orf201Q7Z4U5 140 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 NR2C2APQ86WQ0 139 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 TMEM219Q86XT9 240 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 OR10A7Q8NGE5 316 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 OR51D1Q8NGF3 324 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 MRPL30Q8TCC3 161 aaKnown RBP15.24■□□□□ 0.03
PTCD3-210ENST00000473829 WFDC12Q8WWY7 111 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 MMP28Q9H239 520 aa15.24■□□□□ 0.03
PTCD3-210ENST00000473829 A0A1W2PPE3 182 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 POM121CA8CG34 1229 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 J3QR06 171 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 TOR1AO14656 332 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 ORC5O43913 435 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 TSPAN9O75954 239 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 GALP22466 123 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 PRRX1P54821 245 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 SRSF4Q08170 494 aaKnown RBP15.23■□□□□ 0.03
PTCD3-210ENST00000473829 TPTE2P1Q5T6R2 138 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 Q6ZPA2 131 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 OR2W3Q7Z3T1 314 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 C5orf24Q7Z6I8 188 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 FAM3DQ96BQ1 224 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 FAAP24Q9BTP7 215 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 C16orf95Q9H693 158 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 ABCB10Q9NRK6 738 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 TRAPPC2LQ9UL33 140 aa15.23■□□□□ 0.03
PTCD3-210ENST00000473829 IGHV3-43A0A0B4J1X8 118 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 A0A1B0GUS0 222 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 SMIM30A4D0T7 59 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms