RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 MGMTP16455 207 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 TGFBR1P36897 503 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 TALDO1P37837 337 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 CLDN12P56749 244 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 ACTG1P63261 375 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 MEF2CQ06413 473 aaPredicted RBP10.68□□□□□ -0.7
TPM3-216ENST00000473036 PAN3Q58A45 887 aaKnown RBP10.68□□□□□ -0.7
TPM3-216ENST00000473036 KRBOX4Q5JUW0 171 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 CMTM4Q8IZR5 234 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 OR51D1Q8NGF3 324 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 CORO2AQ92828 525 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 DUX5Q96PT3 197 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 SELENOIQ9C0D9 397 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 SLIRPQ9GZT3 109 aaKnown RBP10.68□□□□□ -0.7
TPM3-216ENST00000473036 NXF2Q9GZY0 626 aaKnown RBP10.68□□□□□ -0.7
TPM3-216ENST00000473036 SPACA1Q9HBV2 294 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 DIABLOQ9NR28 239 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 LINC00312Q9Y6C7 94 aa10.68□□□□□ -0.7
TPM3-216ENST00000473036 SMIM30A4D0T7 59 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 TRIM77I1YAP6 450 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 LDLRAD4O15165 306 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 RGS5O15539 181 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 CRTAPO75718 401 aaPredicted RBP10.67□□□□□ -0.7
TPM3-216ENST00000473036 CLPXO76031 633 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 IGHV1-8P0DP01 117 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 FPR2P25090 351 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 UBE2E1P51965 193 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 PAX5Q02548 391 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 MPV17LQ2QL34 196 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 UBE2NLQ5JXB2 153 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 PRR31Q5SQ13 230 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 C5orf24Q7Z6I8 188 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 OR56B1Q8NGI3 324 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 OR13A1Q8NGR1 328 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 DYRK2Q92630 601 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 TAF15Q92804 592 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM3-216ENST00000473036 GCDHQ92947 438 aaPredicted RBP10.67□□□□□ -0.7
TPM3-216ENST00000473036 ZNF714Q96N38 554 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 NICN1Q9BSH3 213 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 SUCNR1Q9BXA5 334 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 TMEM59Q9BXS4 323 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 BARHL1Q9BZE3 327 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 COMMD3Q9UBI1 195 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 KIF25Q9UIL4 384 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 TGP01266 2768 aa10.67□□□□□ -0.7
TPM3-216ENST00000473036 A0A0B4J203 849 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 hADV38S2A0JD32 116 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 DNAJC9-AS1A6NH13 148 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 FOXI3A8MTJ6 420 aaPredicted RBP10.66□□□□□ -0.7
TPM3-216ENST00000473036 NPFFO15130 113 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 MPIG6BO95866 241 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 GLAP06280 429 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 OMGP23515 440 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 COX7A1P24310 79 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 SAA4P35542 130 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 RPS27AP62979 156 aaKnown RBP10.66□□□□□ -0.7
TPM3-216ENST00000473036 SLC9A3R2Q15599 337 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 PRAMEF5Q5TYX0 476 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 FAM53AQ6NSI3 398 aaPredicted RBP10.66□□□□□ -0.7
TPM3-216ENST00000473036 Q6ZPA2 131 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 DYNAPQ8N1N2 210 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 PPP1R35Q8TAP8 253 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 C6orf62Q9GZU0 229 aaPredicted RBP10.66□□□□□ -0.7
TPM3-216ENST00000473036 LPAR5Q9H1C0 372 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 ABCG5Q9H222 651 aa10.66□□□□□ -0.7
TPM3-216ENST00000473036 UBE2J1Q9Y385 318 aaPredicted RBP10.66□□□□□ -0.7
TPM3-216ENST00000473036 ODF3BA8MYP8 253 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 HOXA3O43365 443 aaPredicted RBP10.65□□□□□ -0.7
TPM3-216ENST00000473036 RBP4P02753 201 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 MELTFP08582 738 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 SLC2A2P11168 524 aaPredicted RBP10.65□□□□□ -0.7
TPM3-216ENST00000473036 PTBP1P26599 531 aaKnown RBP eCLIP10.65□□□□□ -0.77e-6■□□□□ 9.8
TPM3-216ENST00000473036 EFNB2P52799 333 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 BPIFB3P59826 476 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 UBA52P62987 128 aaKnown RBP10.65□□□□□ -0.7
TPM3-216ENST00000473036 ATAD3CQ5T2N8 411 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 Q6YL49 198 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 ZNF497Q6ZNH5 498 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 LHFPL4Q7Z7J7 247 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 GAPTQ8N292 157 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 SAMD12Q8N8I0 201 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 TM2D1Q9BX74 207 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 RHBDL2Q9NX52 303 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 ZNRD1Q9P1U0 126 aa10.65□□□□□ -0.7
TPM3-216ENST00000473036 MEIKINA0A087WXM9 373 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 TMEM272A0A1B0GTI8 110 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 MEIOCA2RUB1 952 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 FAM172BPA6NC97 362 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 POM121CA8CG34 1229 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 SOCS1O15524 211 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 KCNAB3O43448 404 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 MT-ND4P03905 459 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 SNRPBP14678 240 aaKnown RBP10.64□□□□□ -0.71
TPM3-216ENST00000473036 CDK2P24941 298 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 CHATP28329 748 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 TMEM50BP56557 158 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 PITPNAQ00169 270 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 BAMBIQ13145 260 aa10.64□□□□□ -0.71
TPM3-216ENST00000473036 RBM39Q14498 530 aaKnown RBP10.64□□□□□ -0.71
TPM3-216ENST00000473036 SPANXN2Q5MJ10 180 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms