RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 RAB2AP61019 212 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 UBE2KP61086 200 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 OR8G1Q15617 311 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 C18orf21Q32NC0 220 aaPredicted RBP1.93□□□□□ -2.1
CLK1-209ENST00000472679 HES3Q5TGS1 186 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 RBM45Q8IUH3 476 aaKnown RBP1.93□□□□□ -2.1
CLK1-209ENST00000472679 CDRT4Q8N9R6 151 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 RNASE11Q8TAA1 199 aaKnown RBP1.93□□□□□ -2.1
CLK1-209ENST00000472679 PGLYRP3Q96LB9 341 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 EBPLQ9BY08 206 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 RAB1BQ9H0U4 201 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 USH1CQ9Y6N9 552 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 TRPM6Q9BX84 2022 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 IGHV3OR15-7A0A075B7D8 119 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 TRAV8-2A0A0B4J237 113 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 LOC102725191A0A1B0GVB3 256 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 RNASEK-C17orf49H0YIS7 233 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 UBDO15205 165 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 LTAP01374 205 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 BLVRBP30043 206 aaPredicted RBP1.92□□□□□ -2.1
CLK1-209ENST00000472679 RPA3P35244 121 aaPredicted RBP1.92□□□□□ -2.1
CLK1-209ENST00000472679 MP68P56378 58 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 VSNL1P62760 191 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 TSPAN31Q12999 210 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 TMEM176BQ3YBM2 270 aaPredicted RBP1.92□□□□□ -2.1
CLK1-209ENST00000472679 SSX6Q7RTT6 188 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 PRSS27Q9BQR3 290 aa1.92□□□□□ -2.1
CLK1-209ENST00000472679 PLXNA3P51805 1871 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 A0A1W2PRG6 482 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 IGSF23A1L1A6 192 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 ODF3BA8MYP8 253 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 J3QLI3 93 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 NUP62P37198 522 aaPredicted RBP1.91□□□□□ -2.1
CLK1-209ENST00000472679 TSPAN5P62079 268 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 CD164Q04900 197 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 HES1Q14469 280 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 FAM162BQ5T6X4 162 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 OR2Y1Q8NGV0 311 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 CD200R1Q8TD46 325 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 CATSPER2Q96P56 530 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 MYO15BQ96JP2 1530 aa1.91□□□□□ -2.1
CLK1-209ENST00000472679 PLPP3O14495 311 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 EPPINO95925 133 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 PRB1P04280 392 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 HSPA13P48723 471 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 INPP1P49441 399 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 ZNF767PQ75MW2 155 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 SUN5Q8TC36 379 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 DDIT4LQ96D03 193 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 TXNDC17Q9BRA2 123 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 FAAP24Q9BTP7 215 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 TTTY12Q9BZ98 90 aa1.9□□□□□ -2.11
CLK1-209ENST00000472679 A8MWP6 167 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 NDUFS8O00217 210 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 POLR3GO15318 223 aaPredicted RBP1.89□□□□□ -2.11
CLK1-209ENST00000472679 ZNF140P52738 457 aaPredicted RBP1.89□□□□□ -2.11
CLK1-209ENST00000472679 FAM229BQ4G0N7 80 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 ACSBG2Q5FVE4 666 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 Q6ZS52 159 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 OR4C16Q8NGL9 310 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 LRRC20Q8TCA0 184 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 GPR119Q8TDV5 335 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 BCL2L14Q9BZR8 327 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 MAT2BQ9NZL9 334 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 MTCH2Q9Y6C9 303 aa1.89□□□□□ -2.11
CLK1-209ENST00000472679 STRCP1A6NGW2 1772 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 KNCNA6PVL3 124 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 S1PR2O95136 353 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 TNNC1P63316 161 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 DEFA6Q01524 100 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 SS18Q15532 418 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 AHSA2Q719I0 299 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 ST13P4Q8IZP2 240 aaPredicted RBP1.88□□□□□ -2.11
CLK1-209ENST00000472679 CAPZA3Q96KX2 299 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 SNX24Q9Y343 169 aa1.88□□□□□ -2.11
CLK1-209ENST00000472679 ATG2BQ96BY7 2078 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 LY6LH3BQJ8 138 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 CRYGDP07320 174 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 COL4A2P08572 1712 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 CPMP14384 443 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 GABRA3P34903 492 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 GABRA4P48169 554 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 DYNLL1P63167 89 aaKnown RBP1.87□□□□□ -2.11
CLK1-209ENST00000472679 HTR4Q13639 388 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 ZFAND2AQ8N6M9 145 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 OR9I1Q8NGQ6 314 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 FAM45AQ8TCE6 357 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 MPDZO75970 2070 aa1.87□□□□□ -2.11
CLK1-209ENST00000472679 SLIT2O94813 1529 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 FBN3Q75N90 2809 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 GBF1Q92538 1859 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 PSMD11O00231 422 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 TOR1AO14656 332 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 FABP7O15540 132 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 CCDC172P0C7W6 258 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 CCL2P13500 99 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 ZNF7P17097 686 aaPredicted RBP1.86□□□□□ -2.11
CLK1-209ENST00000472679 LCN1P31025 176 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 OR10A3P58181 314 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms