RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 EPRSP07814 1512 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 KCPQ6ZWJ8 1503 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 INTS1Q8N201 2190 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 COL1A1P02452 1464 aaPredicted RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 PLB1Q6P1J6 1458 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 MAGI2Q86UL8 1455 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 TEX14Q8IWB6 1497 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 WDR7Q9Y4E6 1490 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 ABCC5O15440 1437 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 AKAP6Q13023 2319 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 WIZO95785 1651 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 COL4A5P29400 1685 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 COL4A6Q14031 1691 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 HRNRQ86YZ3 2850 aaPredicted RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 DNAH5Q8TE73 4624 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 LRP6O75581 1613 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TARBP1Q13395 1621 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 MAP3K4Q9Y6R4 1608 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 APOBP04114 4563 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 PHLPP2Q6ZVD8 1323 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 ARFGEF3Q5TH69 2177 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 DNAH10Q8IVF4 4471 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 FRMPD1Q5SYB0 1578 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 DIP2BQ9P265 1576 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 CEP170BQ9Y4F5 1589 aaPredicted RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 A0A0G2JQZ4 141 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 OR5H14A6NHG9 310 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 SLC22A20A6NK97 555 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 H3BN98 237 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 PLPP3O14495 311 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 GYG2O15488 501 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 RNF113AO15541 343 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 COX7A2P2O60397 106 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 GPR75O95800 540 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 NAPSAO96009 420 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 GUSBP08236 651 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 GABRA1P14867 456 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF7P17097 686 aaPredicted RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 GSTM3P21266 225 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 CD9P21926 228 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 CD82P27701 267 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 HCCSP53701 268 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 HMGN5P82970 282 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 IRF8Q02556 426 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 DNAJC3Q13217 504 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 SRSF6Q13247 344 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 CASP8Q14790 479 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 UBE2NLQ5JXB2 153 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 C10orf91Q5T1B1 145 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 LELP1Q5T871 98 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 LAIR2Q6ISS4 152 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 GRINAQ7Z429 371 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 SELENOHQ8IZQ5 122 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 OFCC1Q8IZS5 231 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 MUC15Q8N387 334 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TCAIMQ8N3R3 496 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 INO80EQ8NBZ0 244 aaPredicted RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 OR2M3Q8NG83 312 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 OR10P1Q8NGE3 313 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 NT5CQ8TCD5 201 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 ZFAND1Q8TCF1 268 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 DCANP1Q8TF63 244 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TSEN15Q8WW01 171 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 QKIQ96PU8 341 aaKnown RBP eCLIP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 OR52B2Q96RD2 323 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 C20orf144Q9BQM9 153 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TSSK6Q9BXA6 273 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 SHCBP1LQ9BZQ2 653 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF436Q9C0F3 470 aaPredicted RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 ARL6Q9H0F7 186 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TDRD3Q9H7E2 651 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 LYRM4Q9HD34 91 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 DDIT4Q9NX09 232 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TAS2R9Q9NYW1 312 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 SLC23A2Q9UGH3 650 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TBC1D24Q9ULP9 559 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TMCC3Q9ULS5 477 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 HPCAL4Q9UM19 191 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 TFR2Q9UP52 801 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 URGCP-MRPS24S4R325 110 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 CDK13Q14004 1512 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 GRIN2BQ13224 1484 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 ABCA3Q99758 1704 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 HUWE1Q7Z6Z7 4374 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 FAT2Q9NYQ8 4349 aa0.21□□□□□ -2.38
UBXN4-207ENST00000471246 RIMS1Q86UR5 1692 aaKnown RBP0.21□□□□□ -2.38
UBXN4-207ENST00000471246 PAPPAQ13219 1627 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 MYOFQ9NZM1 2061 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 LAMC3Q9Y6N6 1575 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 PKHD1L1Q86WI1 4243 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 ANK3Q12955 4377 aaKnown RBP0.2□□□□□ -2.38
UBXN4-207ENST00000471246 DCAF1Q9Y4B6 1507 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 A0A075B6Q4 140 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 SYNJ2BP-COX16A0A087WUM0 186 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 IGHV1-45A0A0A0MS14 117 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 MUC21A0A0G2JKD1 596 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 A0A0J9YX75 114 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 MUC21A0A140T8X8 626 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 A0A1B0GTI1 187 aa0.2□□□□□ -2.38
UBXN4-207ENST00000471246 LOC102725191A0A1B0GVB3 256 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms