RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ODF3BA8MYP8 253 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 NPIPB11E5RHQ5 1161 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 CLDN34H7C241 214 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 SOCS1O15524 211 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 IL1AP01583 271 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 MELTFP08582 738 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 CLEC2LP0C7M8 214 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 GDNFP39905 211 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 VEGFCP49767 419 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 UBA52P62987 128 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 PLA2G7Q13093 441 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 KRTAP24-1Q3LI83 254 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 ZNF626Q68DY1 528 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 SFXN4Q6P4A7 337 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 BAIAP2L2Q6UXY1 529 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 LDLRAD3Q86YD5 345 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 ABHD12Q8N2K0 398 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 OR56B1Q8NGI3 324 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 OR13F1Q8NGS4 319 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 OR4K15Q8NH41 348 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 RFESDQ8TAC1 157 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 C17orf50Q8WW18 174 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 MDFIQ99750 246 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 FUNDC2Q9BWH2 189 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 IDI2-AS1Q9NZ38 188 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 DAPK2Q9UIK4 370 aa11.8□□□□□ -0.52
SQSTM1-205ENST00000464493 ORC5O43913 435 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 RAB6AP20340 208 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 NFYBP25208 207 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 SSTR5P35346 364 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 EFNB2P52799 333 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 TMEM50BP56557 158 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 LSM3P62310 102 aaKnown RBP11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 Q6ZTK2 550 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 OR10A7Q8NGE5 316 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 FAM216AQ8WUB2 273 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 SSMEM1Q8WWF3 244 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 PTX4Q96A99 478 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 AJUBAQ96IF1 538 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 KIRREL1Q96J84 757 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 HSF4Q9ULV5 492 aa11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 TBL2Q9Y4P3 447 aaKnown RBP11.79□□□□□ -0.52
SQSTM1-205ENST00000464493 A0A087X0M5 115 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 A0A1B0GX30 115 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 FAM172BPA6NC97 362 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 METTL21EPA6NDL7 271 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 C15orf65H3BRN8 121 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 RCC1P18754 421 aaPredicted RBP11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 CD34P28906 385 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 TGFBR1P36897 503 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 IER3P46695 156 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 LTC4SQ16873 150 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 C6orf183Q5T699 404 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 LHFPL4Q7Z7J7 247 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 TMEM86BQ8N661 226 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 BEND2Q8NDZ0 799 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 MALSU1Q96EH3 234 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 ARHGAP5-AS1Q96IT6 56 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 DPAGT1Q9H3H5 408 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 ZNRD1Q9P1U0 126 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 POMT1Q9Y6A1 747 aa11.78□□□□□ -0.52
SQSTM1-205ENST00000464493 C12orf77C9JDV5 145 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 TOR1AO14656 332 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 SPINT2O43291 252 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 IGHV4-59P01825 116 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 TFAP2AP05549 437 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 PRRX1P54821 245 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 IDNKQ5T6J7 187 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 MINOS1Q5TGZ0 78 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 SLC16A12Q6ZSM3 486 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 ZNF596Q8TC21 504 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 C19orf24Q9BVV8 132 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 PECRQ9BY49 303 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 RIMS4Q9H426 269 aaPredicted RBP11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 RAB9BQ9NP90 201 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 MBNL3Q9NUK0 354 aaKnown RBP11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 KCNIP1Q9NZI2 227 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 AK3Q9UIJ7 227 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 MINOS1-NBL1R4GNA1 71 aa11.77□□□□□ -0.53
SQSTM1-205ENST00000464493 F2RL2O00254 374 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 TMEM127O75204 238 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 SNRPBP14678 240 aaKnown RBP11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 PAX6P26367 422 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 HTR1DP28221 377 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 RPS19P39019 145 aaKnown RBP11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 SSX2Q16385 188 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms