RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 IGHV4-59P01825 116 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 FBP1P09467 338 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 RBM39Q14498 530 aaKnown RBP13.87□□□□□ -0.19
VPS52-215ENST00000464425 ATAD3CQ5T2N8 411 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 OR56B1Q8NGI3 324 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 NICN1Q9BSH3 213 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 SPATA2Q9UM82 520 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 UBE2J1Q9Y385 318 aaPredicted RBP13.87□□□□□ -0.19
VPS52-215ENST00000464425 FOXI3A8MTJ6 420 aaPredicted RBP13.86□□□□□ -0.19
VPS52-215ENST00000464425 MCRIP1C9JLW8 97 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 MMP23AO75900 390 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 RBP4P02753 201 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 SNRPBP14678 240 aaKnown RBP13.86□□□□□ -0.19
VPS52-215ENST00000464425 PAX6P26367 422 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 IER3P46695 156 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 EFNB2P52799 333 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 PLA2G7Q13093 441 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 MIDNQ504T8 468 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 PRAMEF5Q5TYX0 476 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 RAB12Q6IQ22 244 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 C16orf87Q6PH81 154 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 BRICD5Q6PL45 260 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 LDLRAD3Q86YD5 345 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 OR13D1Q8NGV5 346 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 LGALS14Q8TCE9 139 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 SSMEM1Q8WWF3 244 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 ACOT12Q8WYK0 555 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 NEDD4LQ96PU5 975 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 CHIAQ9BZP6 476 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 RSL24D1Q9UHA3 163 aaKnown RBP13.86□□□□□ -0.19
VPS52-215ENST00000464425 HSF4Q9ULV5 492 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 PEX16Q9Y5Y5 336 aa13.86□□□□□ -0.19
VPS52-215ENST00000464425 MEIKINA0A087WXM9 373 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 A0A0A6YYD4 124 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 TMEM89A2RUT3 159 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 ARG1P05089 322 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 ZNF182P17025 639 aaPredicted RBP13.85□□□□□ -0.19
VPS52-215ENST00000464425 CHATP28329 748 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 BLVRBP30043 206 aaPredicted RBP13.85□□□□□ -0.19
VPS52-215ENST00000464425 LGALS4P56470 323 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 TMEM86BQ8N661 226 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 PLPPR1Q8TBJ4 325 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 DYNC2LI1Q8TCX1 351 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 AP3S1Q92572 193 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 CORO2AQ92828 525 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 AJUBAQ96IF1 538 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 GAL3ST2Q9H3Q3 398 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 KIF25Q9UIL4 384 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 SESN1Q9Y6P5 492 aa13.85□□□□□ -0.19
VPS52-215ENST00000464425 DPPA5A6NC42 116 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 FAM181BA6NEQ2 426 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 SOCS1O15524 211 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 CA11O75493 328 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 CLPXO76031 633 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 SCGNO76038 276 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 OMGP23515 440 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 CDK2P24941 298 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 SOX6P35712 828 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 VEGFCP49767 419 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 TMEM50BP56557 158 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 SLC35E4Q6ICL7 350 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 BAIAP2L2Q6UXY1 529 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 C12orf54Q6X4T0 127 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 LHFPL4Q7Z7J7 247 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 OR5H6Q8NGV6 325 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 DGCR14Q96DF8 476 aaKnown RBP13.84□□□□□ -0.19
VPS52-215ENST00000464425 CMTM3Q96MX0 182 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 ATG5Q9H1Y0 275 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 DPAGT1Q9H3H5 408 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 PLEKHJ1Q9NW61 149 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 RHBDL2Q9NX52 303 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 TAS2R3Q9NYW6 316 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 OR6C3Q9NZP0 311 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 ZNRD1Q9P1U0 126 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 POMT1Q9Y6A1 747 aa13.84□□□□□ -0.19
VPS52-215ENST00000464425 TRAV39A0A0B4J263 110 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 FAM172BPA6NC97 362 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 RAB27BO00194 218 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 HKR1P10072 659 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 GDNFP39905 211 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 GLP1RP43220 463 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 RSBN1Q5VWQ0 802 aaPredicted RBP13.83□□□□□ -0.2
VPS52-215ENST00000464425 Q6ZTK2 550 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 GAPTQ8N292 157 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 BEND2Q8NDZ0 799 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 OR13A1Q8NGR1 328 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 OR10R2Q8NGX6 335 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 NEK7Q8TDX7 302 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 ABCG5Q9H222 651 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 TMEM133Q9H2Q1 129 aa13.83□□□□□ -0.2
VPS52-215ENST00000464425 CCDC59Q9P031 241 aaKnown RBP13.83□□□□□ -0.2
VPS52-215ENST00000464425 A0A0A6YYH2 397 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 IGHV2-26A0A0B4J1V2 119 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 A6NJ64 397 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 ODF3BA8MYP8 253 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 ARL6IP1Q15041 203 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 C17orf58Q2M2W7 97 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 NKAPLQ5M9Q1 402 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms