RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 RPS27AP62979 156 aaKnown RBP10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 RAB11BQ15907 218 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 Q3ZCU0 254 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 C3orf56Q8N813 242 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 KIRREL1Q96J84 757 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 ZNF747Q9BV97 191 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 TMEM59Q9BXS4 323 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 BANF2Q9H503 90 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 AMMECR1Q9Y4X0 333 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 H3BUX3 64 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 TOR1AO14656 332 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 MPIG6BO95866 241 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 IGLV1-47P01700 117 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 MT-ND4P03905 459 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 MYL9P24844 172 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 QRFPP83859 136 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 C6orf183Q5T699 404 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 DHRS7BQ6IAN0 325 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 OR4P4Q8NGL7 312 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 OR9G1Q8NH87 305 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 C17orf50Q8WW18 174 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 C16orf95Q9H693 158 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 RANBP3Q9H6Z4 567 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 PLGRKTQ9HBL7 147 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 ABCB10Q9NRK6 738 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 ETAA1Q9NY74 926 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 DPM3Q9P2X0 92 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 PEX16Q9Y5Y5 336 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 V9GY05 133 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 KIAA2026Q5HYC2 2103 aa10.58□□□□□ -0.72
R3HDM1-213ENST00000463230 MEX3AA1L020 520 aaKnown RBP10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 A6NHS1 94 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 AIPO00170 330 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 FGF9P31371 208 aaPredicted RBP10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 FAM189A2Q15884 450 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 LHFPL4Q7Z7J7 247 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 C8orf31Q8N9H6 132 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 NDNFQ8TB73 568 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 MRGPRDQ8TDS7 321 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 NEDD4LQ96PU5 975 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 URM1Q9BTM9 101 aaKnown RBP10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 TNFRSF19Q9NS68 423 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 ING3Q9NXR8 418 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 ZNF581Q9P0T4 197 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 PITPNC1Q9UKF7 332 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 LEUTXA8MZ59 168 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 PSMB9P28065 219 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 CCDC144NLQ6NUI1 221 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 GFI1Q99684 422 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 ZNF286AQ9HBT8 521 aa10.57□□□□□ -0.72
R3HDM1-213ENST00000463230 CLPSL1A2RUU4 121 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 TSPAN9O75954 239 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 ARSBP15848 533 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 CHATP28329 748 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 GDNFP39905 211 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 SYT6Q5T7P8 510 aaPredicted RBP10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 SIGIRRQ6IA17 410 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 SHISA2Q6UWI4 295 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 STUB1Q9UNE7 303 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 AK6Q9Y3D8 172 aaKnown RBP10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 C15orf65H3BRN8 121 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 F2RL2O00254 374 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 UNC119Q13432 240 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 OLFML2AQ68BL7 652 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 C11orf88Q6PI97 169 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 FAM89BQ8N5H3 189 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 FAM46BQ96A09 425 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 MMP28Q9H239 520 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 RIMS4Q9H426 269 aaPredicted RBP10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 STEAP1Q9UHE8 339 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 TCF19Q9Y242 345 aa10.56□□□□□ -0.72
R3HDM1-213ENST00000463230 BUB1B-PAK6H3BSN5 160 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 SPINT2O43291 252 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 BRS3P32247 399 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 SSX2Q16385 188 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 LDLRAD2Q5SZI1 272 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 TPRA1Q86W33 373 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 LINC00311Q8N616 119 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 PIFOQ8TCI5 191 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 MBNL3Q9NUK0 354 aaKnown RBP10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 TRAPPC2LQ9UL33 140 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 HSF4Q9ULV5 492 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 SSR3Q9UNL2 185 aa10.55□□□□□ -0.72
R3HDM1-213ENST00000463230 LY6LH3BQJ8 138 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 J3QR06 171 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 TNFAIP8O95379 198 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 OMGP23515 440 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 NFYBP25208 207 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 SSTR5P35346 364 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 RELBQ01201 579 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 TPTE2P1Q5T6R2 138 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 C16orf82Q7Z2V1 217 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 DYNAPQ8N1N2 210 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 ARL11Q969Q4 196 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 LPAR5Q9H1C0 372 aa10.54□□□□□ -0.72
R3HDM1-213ENST00000463230 VCX3AQ9NNX9 186 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms