RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 FAM3AP98173 230 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 AKR1C1Q04828 323 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 GFOD2Q3B7J2 385 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 SNAI3Q3KNW1 292 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 ALKBH6Q3KRA9 238 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 Q5PR19 223 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 OR10K2Q6IF99 312 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 PRSS54Q6PEW0 395 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 OR5AS1Q8N127 324 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 ZFP82Q8N141 532 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 PRSS35Q8N3Z0 413 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 BOLLQ8N9W6 283 aaKnown RBP6.59□□□□□ -1.35
USP4-207ENST00000462673 OR5D14Q8NGL3 314 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 OR10AC1Q8NH08 325 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 CPNE2Q96FN4 548 aaPredicted RBP6.59□□□□□ -1.35
USP4-207ENST00000462673 SMIM8Q96KF7 97 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 AQP10Q96PS8 301 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 AMELYQ99218 206 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 SLC6A7Q99884 636 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 RTL8AQ9BWD3 113 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 CST11Q9H112 138 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 TLNRD1Q9H1K6 362 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 FN3KRPQ9HA64 309 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 SEBOXQ9HB31 216 aaPredicted RBP6.59□□□□□ -1.35
USP4-207ENST00000462673 RHOFQ9HBH0 211 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 TAS2R4Q9NYW5 299 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 HHLA2Q9UM44 414 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 SLC7A11Q9UPY5 501 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 PPP1R3CQ9UQK1 317 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 PTPN13Q12923 2485 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 HECTD1Q9ULT8 2610 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 TMEM235A6NFC5 223 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 TMEM210A6NLX4 147 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 DBX1A6NMT0 343 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 LDLRAD4O15165 306 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 MED6O75586 246 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 BPNT1O95861 308 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 IGHV4-39P01824 125 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 MT-ND4LP03901 98 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 IFNA6P05013 189 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 FBP1P09467 338 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 MUC1P15941 1255 aaPredicted RBP6.58□□□□□ -1.36
USP4-207ENST00000462673 IGFBP3P17936 291 aaPredicted RBP6.58□□□□□ -1.36
USP4-207ENST00000462673 RCC1P18754 421 aaPredicted RBP6.58□□□□□ -1.36
USP4-207ENST00000462673 CA6P23280 308 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 PMELP40967 661 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 RAB5CP51148 216 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 OR8B8Q15620 311 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 SLC16A13Q7RTY0 426 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 BIVMQ86UB2 503 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 CATSPERDQ86XM0 798 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 TGIF2LYQ8IUE0 185 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 ZNF561Q8N587 486 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 BHLHE23Q8NDY6 225 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 OR8B12Q8NGG6 310 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 OR5A2Q8NGI9 324 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 OR51A4Q8NGJ6 313 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 OR13C3Q8NGS6 347 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 OR2AE1Q8NHA4 323 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 OR51E1Q8TCB6 317 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 CASTOR1Q8WTX7 329 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 TCTEX1D2Q8WW35 142 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 PP6455Q8WZ26 134 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 AQP3Q92482 292 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 PIGCQ92535 297 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 CCL17Q92583 94 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 HIST1H2BAQ96A08 127 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 SCGB3A2Q96PL1 93 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 PAPOLGQ9BWT3 736 aaKnown RBP6.58□□□□□ -1.36
USP4-207ENST00000462673 MSL2Q9HCI7 577 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 RAB18Q9NP72 206 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 GPR84Q9NQS5 396 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 PARP11Q9NR21 331 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 GSN-AS1Q9NRJ2 163 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 RAB22AQ9UL26 194 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 SLC22A13Q9Y226 551 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 PIGLQ9Y2B2 252 aa6.58□□□□□ -1.36
USP4-207ENST00000462673 TRAV20A0A0B4J274 112 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 hCG_38984A0A1B0GV85 526 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 LOC107986453A0A1B0GWG9 222 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 A0A1B0GWJ7 208 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 MEX3AA1L020 520 aaKnown RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 C5orf52A6NGY3 159 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 COLCA2A8K830 154 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 PPIHO43447 177 aaKnown RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 FSTL3O95633 263 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 PNPP00491 289 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 NRASP01111 189 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 TTRP02766 147 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 CSN2P05814 226 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 CD99P14209 185 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 ZNF20P17024 532 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 FPR2P25090 351 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 CD200P41217 278 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 GLP1RP43220 463 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 GPR6P46095 362 aaPredicted RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 SULT1A2P50226 295 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 DVL1P1P54792 670 aaPredicted RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 SSTP61278 116 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 SNRPEP62304 92 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms