RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 BCL3P20749 454 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 PSMB8P28062 276 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 SOX6P35712 828 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 REG1BP48304 166 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 RBP2P50120 134 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ATP1B3P54709 279 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 SCAND1P57086 179 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ACTR3P61158 418 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 PSME3P61289 254 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 GNB1P62873 340 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 PPP1R8Q12972 351 aaKnown RBP3.89□□□□□ -1.79
BRCA1-206ENST00000461574 APOFQ13790 326 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ODF4Q2M2E3 257 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 C19orf54Q5BKX5 351 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 SLC35D3Q5M8T2 416 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 TMEM42Q69YG0 159 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 Q6ZNX1 250 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 GTSCR1Q86UQ5 136 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 LYPD6Q86Y78 171 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ANKRD13BQ86YJ7 626 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF679Q8IYX0 411 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 PGAM4Q8N0Y7 254 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 RNF152Q8N8N0 203 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF565Q8N9K5 539 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ASB17Q8WXJ9 295 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 CORO2AQ92828 525 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 UBE2E2Q96LR5 201 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 KCTD7Q96MP8 289 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ADI1Q9BV57 179 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 TMED9Q9BVK6 235 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 YIPF3Q9GZM5 350 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 TUBA4BQ9H853 241 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 GORASP2Q9H8Y8 452 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 REEP1Q9H902 201 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 GNB4Q9HAV0 340 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 NEK6Q9HC98 313 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 FGFR1OP2Q9NVK5 253 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 CALYQ9NYX4 217 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ACTR3BQ9P1U1 418 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 ABCD2Q9UBJ2 740 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 OR52A1Q9UKL2 312 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 SAMHD1Q9Y3Z3 626 aaKnown RBP3.89□□□□□ -1.79
BRCA1-206ENST00000461574 TMEM14AQ9Y6G1 99 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 V9GYS6 101 aa3.89□□□□□ -1.79
BRCA1-206ENST00000461574 MEIKINA0A087WXM9 373 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 IGHV1-3A0A0C4DH29 117 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 KBTBD11-OT1A0A1B0GTJ5 212 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 LINC01619G3V211 115 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 I3L521 148 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ARPC2O15144 300 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 HSPA12AO43301 675 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 SYT7O43581 403 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 CCDC22O60826 627 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 MOSP00540 346 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 GAPDHP04406 335 aaKnown RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 CSN2P05814 226 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 HNRNPCP07910 306 aaKnown RBP eCLIP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 SLC2A2P11168 524 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 IL3RAP26951 378 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 C21orf33P30042 268 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 NPBWR2P48146 333 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 MTCP1P56278 107 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 DIAPH2-AS1Q14236 149 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF146Q15072 292 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 UBE2V2Q15819 145 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 C17orf58Q2M2W7 97 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ASPHD1Q5U4P2 390 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 FAM53AQ6NSI3 398 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 C8orf82Q6P1X6 216 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 HACD2Q6Y1H2 254 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 PLEKHG7Q6ZR37 379 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 HAPLN4Q86UW8 402 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 CPOQ8IVL8 374 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 IZUMO1Q8IYV9 350 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ELMOD2Q8IZ81 293 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 Q8N9W7 124 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 DNAAF1Q8NEP3 725 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 OR10G2Q8NGC3 310 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 DLX4Q92988 240 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 RFT1Q96AA3 541 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 CMTM5Q96DZ9 223 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 CNN2Q99439 309 aaKnown RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 S1PR3Q99500 378 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 FAM110AQ9BQ89 295 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 HSPB9Q9BQS6 159 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 CHCHD6Q9BRQ6 235 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ELOVL1Q9BW60 279 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 CHST5Q9GZS9 411 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ALX4Q9H161 411 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 PPIL3Q9H2H8 161 aaKnown RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF556Q9HAH1 456 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 SEBOXQ9HB31 216 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 HMG20AQ9NP66 347 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 PARP11Q9NR21 331 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 IDI2-AS1Q9NZ38 188 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF107Q9UII5 783 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 PSG11Q9UQ72 335 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 MRPS28Q9Y2Q9 187 aaKnown RBP3.88□□□□□ -1.79
BRCA1-206ENST00000461574 SNX5Q9Y5X3 404 aa3.88□□□□□ -1.79
BRCA1-206ENST00000461574 R4GMQ9 66 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms